Sciurus carolinensis (gray squirrel): 124990122
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Entry
124990122 CDS
T08117
Name
(RefSeq) neurofilament heavy polypeptide isoform X1
KO
K04574
neurofilament heavy polypeptide
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05014
Amyotrophic lateral sclerosis
ncar05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124990122
05022 Pathways of neurodegeneration - multiple diseases
124990122
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124990122
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
124990122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1388
RasGAP_C
Motif
Other DBs
NCBI-GeneID:
124990122
NCBI-ProteinID:
XP_047415794
LinkDB
All DBs
Position
8:128862940..128872444
Genome browser
AA seq
1062 aa
AA seq
DB search
MMSFGGADALLGAPFAPLHGGGSLHYALARKGGSRSAAGSSSGFHSWARTSVSSVSASPS
RFRGAGAASSTDSLDTLSNGPEGCVVAAAAARSEKEQLQALNDRFAGYIDKVRQLEAHNR
SLEGEAAALRQQQAGRAAMGELYEREVREMRGAVLRLGAARGQLRLEQEHLLEDIAHVRQ
RLDDEARQREEAEAAARALARFAQEAEAARVELQKKAQALQEECGYLRRHHQEEVGELLG
QIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHAVQSTLQSEEWFRVRLDRLSEA
AKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKDSLERQRSELEDRHQADIASYQEA
IQQLDTELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECRIGFGPSPFSLP
EALPKIPSTSTHIKVKSEEKIKVVEKSEKETVIVEEQTEEIQVTEEVTEEEEKEAKEEEG
EEEEGEEAEAEEGEEEAKSPPAEEATSPEKEAKSPVKEEAKSPAEEKSPVKEEAKSPAEA
KSPEKAKSPMKDEAKSPAEVKSPEKAKSPVKEEAKSPAEVKSPEKAKSPVKEEAKSPAEV
KSPEKAKSPVKEEAKSPAEVKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKE
EAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKS
PEKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKS
PVKEEAKSPEKAKTLDVKSPEAKTPVKEEVRSPADTKSPEKGKSPAKEEAKSPEKVKSPE
KEAPKKEEVKSPVKEEVKAKEPPKKVEEKTPATPKTEEKDSKKDEVLKKEAPKPEAEDKK
EAAVEKPKESKVEAKKEEAEDKKKAATPEKEAPAKVEVKEEAKPKEKTEVAKKEPDDAKA
KEPSKPAEKEPEKPKKEEAPATPEKKDTKEEKTTEAKKPEEKPKTEAKAKEDDKGVSKEP
SKEAPTPSKSKTEKAEKSSSTDQKDSKPAEKATEDKATKGEK
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcttcggcggcgcggacgcgctgctgggcgctccgttcgcgccgctgcacgga
ggcggcagcctgcactatgcgctggcccggaagggcggctcgcgttcggcggccggctcc
tccagcggatttcactcgtgggcgcggacgtccgtgagctccgtgtcggcctcgcccagc
cgcttccgtggcgcaggcgccgcctcaagcaccgactctctagatacgctgagcaacggg
ccagagggctgcgtggtggcggcggctgcggcgcgcagcgagaaggagcagttgcaggcc
ctgaacgaccgcttcgcgggctacatcgacaaggtgcggcagcttgaggcgcacaaccgc
agcctggagggagaggcggccgcgctgcgacagcagcaggcaggccgcgcagccatgggt
gagctgtacgagcgcgaggtgcgtgagatgcgcggcgcagtgctgcgtctgggcgcggcg
cggggccagctgcgcctggagcaggagcacctgctcgaggacatcgcgcacgtgcgccag
cgcctcgacgacgaggccaggcagcgcgaagaggctgaggcagcggcgcgcgcactcgcg
cgcttcgcgcaggaggccgaagctgcgcgagtcgagctgcagaagaaggcgcaggcgctg
caggaggagtgcggctacctgcggcgccaccaccaggaagaggtgggcgagttgctcggt
cagatccagggctgcggcgccgcgcaggctcaggcgcaggccgaggcgcgcgacgctctc
aagtgcgacgtgacgtcggctctgcgtgagatccgcgcgcagctcgaaggccatgcggtg
cagagcacgctgcagtcagaggagtggttccgagtgaggctggaccgactgtcagaggca
gccaaagtgaatacagacgccatgcgctcagcccaggaggagataactgagtatcggcgt
cagctgcaggccaggaccacagagctggaggcgctgaaaagtaccaaggattccctggag
aggcaacgctctgaactagaggaccgccatcaggctgacattgcatcctaccaggaagcc
atccagcaactggacactgagctgaggaacaccaagtgggagatggcagcccagctccga
gagtaccaggacctgctgaatgtcaagatggctctggatattgagattgctgcttataga
aaacttctggaaggtgaagagtgtcggatcggctttggcccaagtcctttctctcttcca
gaggcactccccaaaattccctccacgtccactcacataaaagtcaaaagtgaagagaag
atcaaggtggtagaaaagtcagagaaggaaactgtgattgtggaggaacagacagaagag
atccaagtgactgaagaagtgactgaagaagaggagaaagaagccaaagaggaggaaggt
gaggaagaagagggagaagaggcagaagcggaagagggagaagaagaagcaaagtctccc
ccagcagaagaggctacatctccagaaaaggaagccaagtcccctgtgaaggaagaggcc
aagtcaccagctgaggaaaagtccccagtgaaagaagaggccaagtcaccagctgaggcc
aagtctccagagaaggctaaatcccccatgaaagatgaagcaaaatcaccagctgaggtc
aagtctcctgagaaggccaagtccccagtaaaggaagaagccaagtctccagctgaggta
aaatccccagagaaggccaagtccccagtgaaggaagaagcaaagtcaccagctgaggta
aaatctcctgagaaggccaagtccccagtaaaggaagaagccaagtctccagctgaggta
aaatccccagagaaggccaagtccccagtgaaggaagaagcaaagtccccagagaaggcc
aagtcccctgtgaaggaagaagcaaagtccccagagaaggccaagtccccagtgaaggaa
gaagcaaagtccccagagaaggccaagtccccagtgaaggaagaagcaaagtccccagag
aaggccaagtccccggtgaaggaagaagcaaagtccccagagaaggccaagtccccagtg
aaggaagaagcaaagtccccagagaaggccaagtccccagtgaaggaagaagcaaagtcc
ccagagaagtccccagtgaaggaagaagcaaagtccccagagaaggccaagtccccagtg
aaggaagaagcaaaatccccagagaaagccaagtccccagtgaaggaagaagcaaagtcc
ccagagaaggccaagtccccagtgaaggaagaagcaaaatccccagagaaggccaagtcc
ccagtgaaggaagaagcaaagtccccagagaaggccaagactcttgatgtaaagtctcca
gaagccaagactccagtgaaggaggaagtacggtcccctgcagataccaaatcccctgaa
aaaggcaaaagccctgccaaggaggaggccaagtccccagagaaggtcaaatcacctgag
aaggaggccccaaagaaagaagaggtgaaatctcccgtgaaggaggaggtgaaagccaaa
gagcccccaaagaaggtagaagagaagactccagccacacccaaaactgaggagaaggat
agcaagaaagatgaggtgctcaagaaggaggctccgaagcctgaggctgaggacaagaag
gaagctgctgttgagaagcccaaagaatccaaagttgaggccaagaaggaagaggcagag
gataagaagaaagcagcgaccccagagaaggaggctcctgccaaggtggaggtgaaggaa
gaagctaaacccaaagaaaagactgaggtggcaaagaaggaaccagatgatgccaaggcc
aaagaacccagcaaaccagcagagaaggaaccagaaaagccaaagaaagaagaggcacca
gcaacaccagaaaagaaagacactaaggaggagaagaccacagaagccaagaagcctgag
gagaaacccaaaacagaggccaaggccaaggaggatgacaagggtgtctccaaagagccc
agcaaggaggcccccacacctagcaaatccaagacagaaaaggctgaaaaatcctctagc
acagaccaaaaagacagcaagcctgcagagaaggccacagaggacaaggccaccaaaggg
gaaaagtaa
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