Sciurus carolinensis (gray squirrel): 124990268
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Entry
124990268 CDS
T08117
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04613
Neutrophil extracellular trap formation
ncar05034
Alcoholism
ncar05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
124990268
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
124990268
09165 Substance dependence
05034 Alcoholism
124990268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124990268
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124990268
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
124990268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
124990268
NCBI-ProteinID:
XP_047416042
EnsemblRapid:
ENSSCRG00010024578
LinkDB
All DBs
Position
8:78317535..79018905
Genome browser
AA seq
890 aa
AA seq
DB search
MMSSPVQPDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVD
PVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQ
QQELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRESKRNQGAVASTEVKQKLQEF
LLSKSATKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDTK
DDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSS
PGSGPSSPNNGPTGNVTENETSVLPPTPHAEQLVSQQRILIHDDSMNLLSLYTSPSLPNI
TLGLPAGPSQLNASNSLKEKQKCETQTLRQGVPLPGHYGGSVPASSSHPHVALEGKPNSS
HQALLQHLLLKEQMRQQKLLVTGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQS
APLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKPARQQLNFAGGSPPDVQPKTDPGTP
LRLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSDNSSRSDSGACVDDTLGQVGA
VKVKEEPVDSDEDAQIQEMESGEQAAFMQQQPFPEPPHTRALSARQAQLAVVGMDGLEKH
RLLSRTHSSPAASILPHPATDRPLQPGSATGIAYDPLMLKHQCVCGSSTTHPEHAGRIQS
IWSRLQETGLLNKCERIQGRKASLEEIQLVHSEHHSLLYGTGPLDGQKLDPRILLGDDSQ
KFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASRVASGELKNGFAVVRPPGHH
AEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAILC
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcaccagtgcagcccgatggggtggctggacgggagcagctcttggctcag
caaagaatgcacagtatgatcagctcagtggatgttaagtcagaggttcctgtgggtctg
gagcccatctcgcctttagacttaaggacagacctcaggatgatgatgcctgtggtggac
cctgtcgtccgtgaaaagcaactgcagcaagagttacttcttatccagcaacagcaacaa
atccagaagcaactcctgatagcagagtttcagaaacagcatgagaacttgacccggcag
caccaggctcaacttcaggagcacatcaagttgcaacaggaacttctagccataaaacag
caacaagaactcctagaaaaggagcagaaactggagcagcagaggcaagaacaggaagta
gagaggcaccgcagagaacagcagcttcctcctctcagaggcaaggatagaggacgagaa
agtaagaggaaccagggggcagtggcaagtacagaagtaaagcagaagcttcaagaattc
ctgttgagtaaatcagcaacgaaagacactccaactaatggaaaaaatcattccgtgagc
cgccatcccaagctctggtacacggctgcccaccacacatcattggatcaaagctctccg
ccccttagtggaacatctccatcctacaaatacacattaccaggagcacaagataccaag
gatgattttccccttcgaaaaactgcctctgagcccaacttgaaggtgcggtccaggtta
aaacagaaagtggcagagaggagaagcagccccttactcaggcggaaggatggaaatgtt
gtcacttcattcaagaagcgaatgtttgaggtgacagaatcctcagtcagtagcagttct
ccagggtctggtcccagttcaccaaacaacggaccaactggaaacgttactgaaaatgag
acttcagttttgccccctactcctcatgcagagcagctggtttcacagcaacgcattcta
attcatgatgattccatgaacctgctaagtctttatacctctccttctttgcccaatatc
accttgggacttccagcagggccgtcccagctcaacgcttcgaattcgctcaaagaaaag
cagaagtgtgagacacagacactcaggcaaggtgttcctctgcctgggcactatgggggc
agcgtcccggcatcttcaagccatcctcacgtggctttagaggggaagcccaacagcagc
caccaggctctcctacagcatttattattgaaagaacaaatgcggcaacaaaagcttctt
gtgactggtggagttcccttacatcctcagtctcccttggcaacgaaagagagaatttca
cctggcattagaggtacccacaaattaccccgtcacagacccttgaatcgaacccagtcg
gcacctttgcctcagagcactttggctcagctggtcattcagcagcaacaccagcaattc
ctggagaagcagaaacaataccagcagcagattcacatgaacaaaccagcaaggcaacag
ctcaactttgctggaggatcacctccagatgttcaaccaaagacagaccctggtacccca
ctgagactgctttcgaaatctattgaacaactgaagcaaccaggcagtcacctggaggaa
gctgaggaagagcttcagggggaccaggcgatgcaggaagacagagcgccctctagtgac
aacagcagtaggagcgacagcggtgcttgtgtggatgacacactcggacaagttggggct
gtgaaggtcaaggaagagccagtggacagtgatgaagatgctcagatccaggaaatggaa
tctggggagcaggctgcttttatgcaacagcagcccttcccggagcccccgcacacacgt
gcgctctcggcgcgccaggctcagctggctgtggttggcatggatggattagagaaacac
cgtcttctctccaggactcattcttcccccgctgcctccattttaccacaccctgcaacg
gaccgccccctccagcctggctctgcaactggaattgcctatgaccctctgatgctgaaa
caccagtgcgtttgtggcagttccaccacccaccctgagcatgctgggcgaatacagagc
atctggtcacggctacaagaaactggactgctaaataaatgtgagcgaattcaaggtcga
aaagccagcctggaggaaatacagcttgttcattctgaacatcactcactgttgtatggc
actggccccctggatggacagaagctggaccccaggatactcctaggtgatgactctcaa
aagtttttttcctccttaccttgtggtggacttggggtggacagtgacaccatttggaac
gagctgcactcgtccggtgctgcacgcatggctgttggctgtgtcatcgagctggcttcc
agagtggcctcaggagagctgaagaatgggtttgctgttgtaaggcccccaggccatcac
gccgaagaatctgcagccatggggttctgcttttttaattcagttgcaattaccgccaaa
tacttgagagaccaactaaatataagcaagatattgattgtagatctggatgttcaccat
ggaaacggtacacagcaggccattttatgctga
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