Sciurus carolinensis (gray squirrel): 124990326
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Entry
124990326 CDS
T08117
Name
(RefSeq) serine/arginine-rich splicing factor 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
ncar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124990326
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124990326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124990326
Spliceosome [BR:
ncar03041
]
Common components
Common spliceosomal components
SR proteins
124990326
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_7
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
124990326
NCBI-ProteinID:
XP_047416196
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All DBs
Position
8:132612093..132619036
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AA seq
221 aa
AA seq
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MSGWAEERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
DPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPP
SGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYI
RVYPERSTSYGYSRSRSGSRGRDSPYQSRGSPHYYSPFRPY
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctgggcggaggagcgcggcggcgagggcgacgggcgcatctacgtggggaac
cttccgaccgacgtgcgcgagaaggacctggaggacctgttctacaagtacggccgcatc
cgcgagatcgagctcaagaaccggcacggcctcgtgcctttcgccttcgtgcgcttcgag
gacccccgagatgctgaggatgcaatttatggaaggaacggttatgattatggccagtgt
cggcttcgtgtggagttccccaggacttatggaggtcggggtgggtggccccgtggtggg
aggaatggccctcctacaagaagatctgatttccgagttcttgtttcaggacttcctccc
tcaggcagctggcaggacctgaaagatcacatgcgagaagctggagatgtctgttatgca
gatgtgcagaaggatggaatggggatggttgaatatctcagaaaagaagacatggaatat
gccctgcgtaaactggatgacaccaaattccgctctcatgagggtgaaacttcctacatc
cgagtttatcctgagagaagcaccagctatggctactcacggtctcgatctgggtcaagg
ggccgtgactctccataccaaagcaggggttccccacactactactctcctttcaggccc
tactga
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