KEGG   Sciurus carolinensis (gray squirrel): 124990366
Entry
124990366         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: transportin-3-like
  KO
K15436  transportin-3
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03013  Nucleocytoplasmic transport
ncar03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124990366
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124990366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ncar03016]
    124990366
Transfer RNA biogenesis [BR:ncar03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    124990366
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_2nd Xpo1 TPR_TNPO3_IPO13_3rd Importin_rep_3
Other DBs
NCBI-GeneID: 124990366
NCBI-ProteinID: XP_047416302
LinkDB
Position
8:24968895..25046589
AA seq 860 aa
MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIRQDVESC
YFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMP
SWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTV
VSLLMTCVEKAGTDEKMLMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSN
LHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEV
IHGIFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFRMRVSDLVKDLIFLIGSMECF
AQLYSTLKEGNPPWEVTEAVLFIMAAIARVLIPENNPTLVEVLEGVVRLPETVHTAVRYT
SIELVGXMSEVVDRNPQFLGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEPSNGI
SSDPTVFLDRLAVIFRHTNPIVENGQTHPCQKLRQKIWPVLSETLNKHRADNRIVERCCR
CLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSILVDEYGMEXGCRQGLXTC
IQALCIPTFQLLDQQNGLQNHPDTVXDLFRLATRFIQRSPVTLLRSQVVIPILQWAIAST
TLDHRDANCSVMRFLRDLIHTGVANDHEEDFELRKELIGQVMNQLGQQLVSQLLHTCCFC
LPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLKGFAKETNRGAVTVTHKHLTDFHKQVLG
DAEECKQVCWALRDFTRLFR
NT seq 2583 nt   +upstreamnt  +downstreamnt
atggaaggagcaaaaccgacattgcagctggtgtaccaggcagtgcaggctctttaccac
gacccggatcccagcggaaaggagcgcgcctcgttttggcttggggagctgcagcgttcg
gttcatgcctgggagatttctgatcagttgttacagatccgacaggatgtggaatcatgc
tattttgctgcacagaccatgaagatgaagattcagacctcattttatgagctccctaca
gactctcatgcctccttaagggactcattgctaacccatatccagaacttgaaagactta
tcacctgtcattgtaacgcagctggctttagcaatagcagaccttgccctacagatgcct
tcttggaagggttgtgtacagacattggtggaaaaatatagcaatgatgtaacttctttg
ccatttttgctggagatccttacggtgttacctgaagaagtacatagtcgttccttacga
attggagctaacaggcgcacagaaattatagaagatttggccttctactccagtacagta
gtatctctgttgatgacctgtgtagaaaaagccggaacagatgagaaaatgctcatgaag
gtctttcgctgtttgggaagttggtttaacttgggagttttggacagtaacttcatggct
aacaataagttactagcactgctttttgaggttttgcaacaggataagacctcatccaac
ctacacgaagctgcttcagactgtgtgtgctcagctctttatgccattgagaacgtggaa
actaacttgccattagccatgcagctttttcagggagtcctgacgttggagactgcctat
catatggctgtggcacgtgaagatttagacaaagttctgaattactgccgtattttcact
gaactatgtgaaacttttcttgaaaaaattgtttgtactccaggccaaggtcttggagac
ctacgaactttggaactgcttcttatatgtgcagggcatcctcaatacgaggtagtagaa
atttcctttaacttttggtaccgactaggggagcatttgtacaaaactaacgatgaagtt
attcatggcatcttcaaagcttacattcagaggctgcttcatgccttggctcgacactgc
cagctggaaccagaccatgagggggttcctgaagaaactgatgactttggcgagtttcgg
atgcgggtatcagacctggtgaaggatttgattttcttgattgggtctatggagtgtttt
gctcagttgtattctactctgaaagaaggcaacccaccctgggaggtgacagaagcggtt
ctctttatcatggctgctatagcaagagtgttgatccctgagaataatccaacactggtg
gaggtcttagaaggagtcgtccgtctcccagagactgtccatacagctgtgcgatacact
agcattgaattggttggangaatgagcgaagtggttgatcgaaatcctcagttccttggg
acagcacttgtccttgccagattaccgttggataagattactgaatgtcttagtgagcta
tgttctgttcaggttatggcattgaagaagctgttgtctcaggagcccagcaatggcata
tcctcagatcccactgtgttcttagatcgcctggcagtgatatttagacataccaatccc
attgtggaaaatggacagactcatccatgccaaaagctgaggcaaaagatatggccagtt
ttatccgagactctaaacaaacaccgggctgataatcggattgtagagcgttgttgcagg
tgcctgcgctttgctgttcgctgtgtgggcaaaggatctgcagccctgctacagccacta
gtcacacagatggtgaatgtataccacgtacatcagcattcctgtttcctgtaccttggc
agtatccttgtggatgagtatggtatggaangaggctgtcggcagggactctagacatgc
atccaggcactgtgcatccccacctttcaactcctggaccagcagaatggtctccagaac
caccctgacactgtangtgacctgttcaggctagctaccaggtttattcagcgtagccct
gtcacgttattgaggagccaagtagtaattccaatcttacaatgggccattgcctctact
accctggatcaccgggatgccaattgtagtgtcatgaggttcctacgagaccttatccat
acaggggtagccaatgatcatgaagaagactttgaattacggaaagaactaattggacag
gtgatgaaccagcttggacaacaacttgtaagccagttgctccacacatgttgcttttgt
ctccctccctatactttaccagacgtggctgaagtgctgtgggagatcatgcaggttgac
aggccgaccttttgtcgctggttagagaattccttgaaaggttttgcaaaggagacaaac
cgtggagctgttacagtgacacacaaacatcttacagacttccacaagcaagtactaggt
gatgctgaggaatgtaagcaagtttgctgggccttgcgagacttcaccaggttatttcga
tag

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