Sciurus carolinensis (gray squirrel): 124990408
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Entry
124990408 CDS
T08117
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1-like
KO
K22869
WD repeat-containing protein 60
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124990408
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
Dynein and associated proteins
124990408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_RFWD3
WDR55
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
124990408
NCBI-ProteinID:
XP_047416379
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Position
8:complement(236279..308440)
Genome browser
AA seq
1061 aa
AA seq
DB search
MEPGKRRTKDDTWKADDLRKHLWAARSGSPKEEKKHREKKLHKESEVELPEPREHKYRDP
DPDTRHRGRMTGGDTHTSKESPRGERDREKLRERRRDIKDREKEKSKEKYREQDAEKPHS
RGKDREKERDRRARREELRQTTAYHNLLGREVHDWPLEKVERKTRSVSKVRIEEKEKRDE
DSERVDEDRERRYRERKLQYGDSKDNPLKYWLYKEEGERRHRKPREADRERKHREKSSTR
EKREKHLKEKSNSFSDKEGEERHKEKRHKDVFHLDERHRSSTDRKERLWKEEHRKRASKN
GDHRSRGASLRRDGTGNQHAENVARSSGRERGSRWKEIEREDVDLENPGTNDYPVGFEDD
FEDYEDDFEVCDGDDDSSNESELTEKPEELPLARKREIQEIQKAIYAENERIGELSSELL
QKREPAESYREPRADVNSSPSRAPVCGIFVDFATASHRQKSRIQALKQKTRSTKLLRLID
LDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQYNEDNVERDTQTEDIETRDVWTQH
PGEGAIVSGGSKEQDIFDATVVPRIDTPRLSSFLRAACQVVAVLLEEDRLAAGPSWTLGA
EGNTLCISDSSSQLNTSLPFLEGRKVSCLHASRVQRQTVVSVHDLPAKASAQLLDHRYIL
CVWDIWQPSGPQKVLICESKVTCCCFGPYKAFLLFAGTVHGSVVVWDLREDSRIHHCVKL
SDCFWTLRTATFSTDGVLASVSHRSPLQALEPVSSPASRKQSSVLSPFSTQEGTSGLSFH
VASLDESGVLNMWVVVELPKADIAGSISDLGLIPGGRIKLVHSAALQVGDSLSRKGSELW
GPTQALSVRFLPADPDHFVVGTDLGLISHGTRQDLRVSPKLFRPWQRGIRPVKVNVIDFS
PFGEPVFLAGCSDGSVRLHQLTSAQPLLQWDGSTGGRAVAALQWSPTRPAVFLVQDVASR
IYLWDLLQSDLGPVATQPVSPDSLVAMTVLGEPEKASGSFQALVLARASGTVDVQYLKRQ
WTSPEADEHSRLRLFLQGALWKEGGCPREGTIQGSALQDLR
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgggaagagaagaaccaaagacgatacttggaaagcagatgacctcagaaaa
cacctttgggctgcacgatcaggcagtcccaaggaagagaagaaacacagagaaaagaag
ctgcacaaggagtcagaagtggagctccctgaacccagggagcacaagtacagggaccca
gacccagacactcgacaccggggcagaatgaccgggggagacactcacacctccaaggag
agtcctcgtggggagagagaccgagagaaactccgagagaggaggagagacataaaagac
cgggagaaggaaaaatcaaaagagaagtatcgagaacaagatgcagagaagcctcacagc
agaggaaaagacagagagaaagaaagagacagaagagctcggagggaagagctgaggcag
acgaccgcttatcacaacctcctgggtcgagaggttcatgactggcccctggagaaggtg
gagaggaagactcgatcagtaagcaaagtaagaattgaagagaaagaaaagcgagatgaa
gactctgaaagagtagatgaagacagagaaagaagataccgagaaagaaagttgcagtat
ggggacagcaaagacaaccctctcaagtactggctttataaagaggaaggcgaaaggagg
cacaggaagccacgggaagcagatcgagaaaggaaacaccgagaaaaaagcagcacacgg
gagaaaagagaaaagcacttgaaagaaaagagcaactcattctctgacaaagaaggggaa
gaaagacataaagaaaaacgacataaagacgtctttcatcttgatgagaggcaccgaagt
agcacggatagaaaagagagactgtggaaagaagagcacaggaaaagggcgtccaagaat
ggcgaccacagaagccgaggagcaagtctgagaagagatgggactggcaaccagcatgcg
gagaatgtagcgaggagtagtggaagagagcggggctcaaggtggaaggagattgaaagg
gaagacgtggatttagagaatcccgggactaatgactatccagttggttttgaagatgat
tttgaagactatgaagatgactttgaggtttgtgatggagatgatgatagcagcaacgag
tctgagttaacagaaaaacctgaagaacttcctttagcccgaaaaagggagatacaagaa
attcaaaaagccatctatgcggaaaacgaaaggatcggcgagctgtcttcggagctgttg
cagaagcgagagccagcggagagctaccgggagcccagggcagatgtgaacagctcccca
tccagagcccctgtttgtgggatttttgtggactttgccacagcctcgcaccgtcagaag
agccggattcaggcccttaagcagaagactcgaagtacaaaactacttcggcttattgat
ttagatttttcgttcactttctctctcttggatttaccaccagtgaatgaatacgacatg
tatatcagaaactttgggaaaaaaaataccaagcaggcatatgttcagtataatgaagat
aatgttgaaagagacactcagactgaagacatagagaccagggatgtgtggacccagcat
ccgggagaaggtgccattgtatctggaggtagtaaagaacaagatatctttgatgctaca
gttgtaccaaggattgacactccaagattatccagctttctccgggcagcatgtcaggtg
gttgccgttttgcttgaagaggaccgcttggctgctggacccagctggaccctcggggct
gaaggcaacactctctgcattagcgatagctcttctcagttgaacactagcctgccgttt
cttgaaggtcgaaaagtatcctgcttgcatgcctctcgagttcagaggcaaactgtggtc
tctgtacacgatttacctgcgaaggcctctgcccagctgctggaccacagatacatcctc
tgtgtctgggacatctggcagccttcagggccccagaaggtcctgatatgtgagtccaag
gtcacatgctgctgcttcggcccttataaagcatttttgctgtttgctgggacagtgcat
ggctccgtggtcgtgtgggacctgagagaggactctaggatacaccactgtgtgaagctg
agcgattgtttctggaccttgcggacagccacgttttccaccgatggagtcctcgcctcc
gtgagccaccgaagtcctctccaggccctggagcccgtctcctcgccagcctcccggaag
cagagctccgtgctctcgcccttctccactcaggaaggcacgtcgggcctgtccttccac
gttgcttccttggatgagagcggggtgctcaacatgtgggtggttgtcgaattgccaaag
gcggatatcgcaggctcgatcagtgacttaggcctcatccctggagggagaatcaagctg
gtgcacagtgctgcgctgcaggtgggcgacagcctttcccgcaaagggagtgaactctgg
gggcccacccaggcgctgagcgtcagatttctgcctgcagacccggatcactttgtcgtt
ggcacggacctgggtcttataagccacggcacaagacaagacttgagagtgtctcccaaa
ctgttccggccttggcaacgtggtatcagaccagtgaaagttaatgtcattgatttttca
ccatttggagaaccggttttcttggctggctgctccgacggcagcgtcaggctgcaccag
ctcacctccgcgcagccgctgttgcagtgggacggcagcacggggggccgcgctgtggct
gcgctgcagtggtccccgacgaggcccgcggtgttcctggtgcaggacgtcgcatccagg
atttacctgtgggaccttctgcagagcgatctgggccctgtggccacgcagcccgtctcc
ccagacagcctggtggccatgactgtcctgggggagccagagaaggccagtggcagcttc
caggcactggtgcttgccagggcctctggcacagtcgacgtccagtacctgaagaggcag
tggacaagcccagaggcagatgagcacagccgactgcgtctgttcctgcagggagccctg
tggaaggagggaggctgcccacgtgagggcaccatccagggcagcgctttgcaagacctg
cgctga
DBGET
integrated database retrieval system
