Sciurus carolinensis (gray squirrel): 124990421
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Entry
124990421 CDS
T08117
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
124990421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124990421
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
124990421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
124990421
NCBI-ProteinID:
XP_047416420
LinkDB
All DBs
Position
8:complement(19794152..19996723)
Genome browser
AA seq
749 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERIAYQRNDDDEEEAARERRRRARQERLRQKQEEESLG
QVTDQVEVHAQNSVPDEESKPSTTNTQVEGDDEAALLERLARREERRQKRLQEALERQKE
FDPTIADANLSLSSGRMQNDTAENETAEKEGKRESRQERYEIEETEIVTKSYQKNDWRDA
EDKKKDGKEKEEEEEEKPKQGGTGENQVEVLVEEKTTEAREETVVMALKNGEIDAEESKL
EDRERGSEEISHHEKMEEEERERAEAERLRLEAEERERIKAEQEKQIADEQARIEAEERA
AAQERERREAEERERIKEEERRAAEERRRAQAEEEEKARLEEQKRKKQLEEKRNEMQETK
IKGEKVEEKREGKRVNEKKVHEDKLQTAVLKKQEEEKGAKGQAQRQKSQEDKTTFKKEEI
KDEKIKKDKEPKEEVKSFLDRKKGFTEVKSQNGEFMTHKLKHTENTFSPSRPGARAGEAE
GAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQR
RKQEEADRKAREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKGSSLK
IEERAEFLNKSVQKSSGVKTTHQAAVVSKIDSRLEQYTSAIEGTKTAKPTKPAASDLPVP
AEGVRNIKSMWEKGNVFSSPTASGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPAPKPS
DLRPGDVSGKRNLWEKQSVDKVTSPTKQV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggatgattttgaacgtcgcagagaactcaggaggcaaaagagggaggagatgcggctg
gaagcagaaagaattgcctatcagaggaacgacgatgacgaagaagaggcagcccgggaa
cgccgccggcgagcccgacaggaacggctgcggcagaagcaagaggaagaatccttggga
caggtgaccgaccaggtggaggttcacgcccagaacagtgtccccgatgaagagtccaag
ccaagcaccaccaacacacaggtggaaggcgatgacgaggctgctcttctggagcgcctg
gcccggagagaagagagacgccagaaacgccttcaggaggccctggagcggcagaaggag
ttcgacccaacaatagcagatgccaacctgtcactctccagcggaagaatgcaaaatgac
acagctgaaaacgagactgcggagaaggaaggaaaaagagaaagtcgccaggagagatat
gagatagaagaaacagaaatagtcaccaagtcctaccagaagaatgactggagggatgct
gaagacaagaagaaagatggaaaagaaaaggaggaggaggaagaagagaagccaaagcaa
ggaggcactggagaaaatcaggtagaggtgctggtggaagagaaaactacagaagcccgg
gaggaaacagtggtcatggcattgaaaaatggggaaatcgatgcagaagagtctaaactc
gaggacagggaacgaggctcagaggagatttcccatcatgaaaagatggaagaggaagaa
agggaaagagcagaggcagaaaggctaaggttggaagcagaagaaagggaaagaattaaa
gctgaacaagaaaaacagatagcagatgaacaagcaagaattgaagctgaagaaagggca
gctgcacaagaaagagaaaggagggaggcagaggagagggaaaggattaaggaggaagag
agaagggcagcagaggagaggcggagagcccaagcagaggaggaggagaaggctaggcta
gaagagcaaaaacgtaaaaagcagctagaagagaagaggaatgaaatgcaagagacaaag
ataaaaggggagaaagtagaagagaaaagagaagggaagagggtaaatgaaaagaaagtg
cacgaagataaacttcaaacagctgtcctaaagaaacaggaagaagaaaagggagctaaa
gggcaagctcaaaggcaaaagtcccaagaagacaagactaccttcaaaaaggaagagatc
aaagatgagaagattaaaaaagacaaagagcccaaagaagaagtgaagagcttcttggat
cgaaagaagggatttacagaagtgaagtcacagaatggagaattcatgacccacaaactt
aaacatactgagaatactttcagccccagccgccctggagccagggccggggaggccgag
ggcgccccgcaggtggaagccggcaagcggctggaggagctccgccgccgccgcggggag
accgagagcgaagagttcgaaaagctcaaacagaagcagcaggaggcggccttggagctg
gaggagctgaagaaaaagagggaggaacgaaggaaggtcctggaggaggaagagcagagg
aggaagcaggaggaagccgaccgcaaagccagagaggaggaagagaagaggaggctaaag
gaagagattgaaaggcgaagggcggaagctgccgagaaacgccagaaaatgccagaagat
ggcttgtcagacgacaagaagccgttcaagtgcttcactcctaaaggttcatctctcaag
atagaagaacgagcagaatttttgaataagtctgtgcagaaaagcagcggtgtcaaaaca
actcatcaagcagcagtagtctccaagatagacagcagactggagcaatacaccagtgca
attgagggaacaaaaactgcaaaacctaccaagccagcagcctctgatcttcctgttcct
gctgaaggcgtacgcaatatcaagagcatgtgggagaaagggaatgtgttttcctccccc
actgcatcaggcacaccaaataaggaaaccgctggcctgaaggtgggagtttcgagccgc
atcaatgaatggctaactaaaaccccggatgggaacaagtcgcctgctcccaaaccttct
gacttgaggccaggagatgtatctggcaaacggaacctctgggaaaagcagtctgtggat
aaggtgacgtcccccactaagcaggtttga
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