Sciurus carolinensis (gray squirrel): 124990526
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Entry
124990526 CDS
T08117
Name
(RefSeq) semaphorin-3C
KO
K06840
semaphorin 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124990526
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Gene cluster
GFIT
Motif
Pfam:
Sema
I-set
Ig_3
PSI
ig
V-set
Ig_2
NUP210_Ig
Motif
Other DBs
NCBI-GeneID:
124990526
NCBI-ProteinID:
XP_047416556
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Position
8:60360254..60517685
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AA seq
751 aa
AA seq
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MAFQAICVLVGVFICSICVKGSSQPQARVYLTFDELRETKTSEYFSLSHHPLDYRILLMD
EDQDRIYVGSKDHILSLNINNISQEPLSVFWPASTIKVEECKMAGKDPTHGCGNFVRVIQ
TFNRTHLYVCGSGAFSPVCTYLNRGRRSEDQVFMIDSKCESGKGRCSFNPNVNTVSVMIN
EELFSGMYIDFMGTDAAIFRSLTKRNAVRTDQHNSKWLSEPMFVDAHVIPDGTDPNDAKI
YFFFKEKLTDNNRSTKQIHSMIARICPNDTGGLRSLVNKWTTFLKARLVCSVTDEDGPET
HFDELEDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKEGPN
HQLISYQGRIPYPRPGTCPGGAFTPNMRTTKEFPDDVVTFIRNHPLMYNSIYPIHRRPLI
VRIGTDYKYTKIAVDRVNAADGRYHVLFLGTDRGTVQKVVVLPNNSSTSGELILEELEVF
KNHVPITTMKISSKKQQLYVSSNEGISQVSLHRCHIYGTACADCCLARDPYCAWDGHSCS
RFYPTGKRRSRRQDVRHGNPLTQCRGFNLKAYRNAAEIVQYGVKNNTTFLECAPKSPQAS
IKWLLQKDKDRRKEVKLNERIIATPQGLLIRSVQDSDQGLYHCIATENSFKQTIAKINFK
VLDSEMVAVVTDKWSPWTWASSVRALPFHPKDIMGAFSHSEMQMINQYCKDTRQQHQQGD
DSQKLRGDYGKLKALINSRKSRNRRNQLPES
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcattccaggcaatttgcgtgttggttggagtatttatttgttctatctgtgtaaaa
ggatcttcccagccccaagcaagagtttatttaacatttgatgagctccgggaaaccaag
acctctgagtacttcagcctctcccaccaccctttagactacaggatactactaatggat
gaagatcaggaccgaatctatgtgggcagcaaagaccacattctgtccctgaatattaac
aatataagtcaagaacctttgagtgttttctggccagcatctacgatcaaagttgaagag
tgcaaaatggctggcaaggatcctacacatggctgtgggaacttcgtccgtgtgatccag
acgttcaatcgcactcatctgtatgtctgtggcagtggtgctttcagcccagtttgcact
tacctgaacagagggaggaggtcagaggaccaagttttcatgattgactccaagtgtgaa
tctggaaaaggacgatgctctttcaaccccaatgtgaatactgtatctgttatgatcaat
gaggagcttttctcaggaatgtatatagatttcatggggacagatgctgctatttttcga
agtttaaccaagaggaatgcagtcagaactgatcaacacaattccaaatggctgagtgaa
ccgatgtttgtggatgcacatgtcattcctgacggcactgatccaaatgatgctaagata
tacttcttcttcaaagaaaagctgactgacaataacaggagcacaaaacagattcattct
atgattgctagaatttgccctaatgacactggtggactgcgtagccttgtgaacaagtgg
accaccttcttaaaagcaaggctggtgtgttcagtcacagatgaagatggcccagaaaca
cacttcgatgaattagaggatgtgtttctgctggaaactgataatccaaggacaacacta
gtgtatggcatttttacaacatcaagctcagtttttaaaggttcagcagtgtgtgtgtat
catttatctgatatacagactgtgtttaatgggccttttgcccacaaagaaggacccaat
catcagttgatttcctatcaggggagaattccataccctcgccctggaacttgcccagga
ggagcatttacacccaacatgagaaccaccaaggagttcccagatgacgttgtcacattt
attcggaaccatcctctcatgtacaattccatctacccaatccacaggcggcctttgatt
gtccgcataggcaccgactacaagtacacaaagatcgctgtggatcgagtgaatgctgca
gatggtagataccatgtcctgtttcttggaaccgatcggggaactgtgcaaaaggtggtg
gttctgcccaataacagctccaccagcggagagctcattctagaggagctggaagtcttt
aagaatcacgttcccataacaacaatgaaaatctcatccaaaaagcaacagttgtatgtg
agctccaatgaagggatttcccaagtgtccttgcatcgctgccacatctacgggacagcc
tgtgctgactgctgtctggcaagggacccttactgcgcctgggatggccactcttgctct
aggttctacccaactgggaagcggaggagccgaagacaagatgtgagacatggaaatcca
ctgactcaatgcagaggatttaatctaaaagcatatcgaaatgcagctgaaattgttcag
tatggagtaaaaaataacaccactttccttgagtgtgcccccaagtctccacaggcatct
atcaagtggttgctacagaaagacaaagacaggaggaaagaggttaagctaaatgaacgt
attatagccactccacaaggacttctgatccgctctgttcaagattctgaccaaggactg
tatcactgtattgcaacagaaaacagcttcaaacagaccatagccaagatcaacttcaaa
gttttagattcagaaatggtggctgttgtgacagacaagtggtcaccatggacctgggcc
agctctgtgagggctttacctttccacccgaaggacatcatgggggcattcagccactca
gaaatgcagatgatcaatcaatactgcaaagacactcgacagcaacatcaacagggggac
gattcacaaaaattgagaggggactacggcaagttaaaggctctcatcaatagccggaaa
agtagaaacaggagaaatcagttgccagagtcataa
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