Sciurus carolinensis (gray squirrel): 124990561
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Entry
124990561 CDS
T08117
Name
(RefSeq) syntaxin-2 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04130
SNARE interactions in vesicular transport
ncar04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124990561
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
124990561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124990561
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124990561
Membrane trafficking [BR:
ncar04131
]
SNARE
Syntaxin (Qa)
Stx-PM
124990561
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124990561
Exosomal proteins of other body fluids (saliva and urine)
124990561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Prominin
DksA_N
DUF3671
ETRAMP
Tlp
DUF16
CwsA
STX6_10_61_N
Spectrin_Anc-1_2
T2SSF
Nbl1_Borealin_N
DUF2205
FH2
Motif
Other DBs
NCBI-GeneID:
124990561
NCBI-ProteinID:
XP_047416647
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All DBs
Position
8:complement(142010012..142070422)
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AA seq
288 aa
AA seq
DB search
MRDRLPDLTACRKDDDGDTTVVVERDHFMDDFFHQVEEIRNAIAKIAQCVEDVKKDHSII
LSAPNPEGKIKEELEDLNKEIKKTANRIRAKLKSIEQSFDQDENGNRTSVDLRIRKTQHS
VLSRKFVEVMTEYNEAQTLFRERSKGRIQRQLEITGRTTTDDELEEMLESGKPSIFTSDI
ISDSQITRQALNEIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIEKNVMNAA
DYVEHAKEETKKAIKYHSKARRKKWIIAAVAVALLAVLALIIGLSVGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaccggctgccggacctgacggcgtgtaggaaagatgatgacggagacacgact
gttgttgttgaaagggaccattttatggatgatttcttccatcaggtggaggagatcaga
aacgctatagcaaaaatagcgcagtgtgtggaagacgtcaagaaggaccacagtatcatt
ctctctgctccaaacccagaaggaaaaataaaagaagaacttgaagacctgaacaaagaa
atcaagaaaactgctaacagaattcgagccaagttaaagtccattgagcagagttttgat
caggatgagaatgggaaccgaacatctgtggatcttcggatacgaaaaacccagcattca
gtactttctcgaaaatttgtggaagtcatgacagaatacaatgaagcgcagactttgttt
cgggagcgaagcaaaggacgcatacagcgccagttggaaataaccggaaggaccaccaca
gatgacgagctggaagagatgttggagagtgggaagccatccatcttcacctcggatatt
atatcagattcacaaattactagacaagctctgaatgaaattgagtcgcgtcacaaagac
atcatgaagctggagacgagcatccgagagctgcacgagatgttcatggacatggccatg
tttgttgagacccagggtgaaatgatcaacaacatagagaagaacgttatgaatgctgcc
gactatgtagagcacgctaaagaagaaactaaaaaagctattaaatatcacagcaaagca
agaaggaaaaagtggataatcgctgccgtggcagtggctctgctcgccgtactcgctcta
attattggcttatcagttggcaaatga
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