Sciurus carolinensis (gray squirrel): 124990578
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Entry
124990578 CDS
T08117
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00600
Sphingolipid metabolism
ncar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
124990578
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
124990578
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
124990578
NCBI-ProteinID:
XP_047416672
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Position
8:122206600..122234230
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AA seq
867 aa
AA seq
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MTTFRRRLAEWRLPFLKQVVLGVPQWFPKATIFDSPRETTMAFPHLQQPSFLLASLKADS
INKPFAQRCQDLVKVIEDFPAKELHTIFPWLVESIFGSLDGILIGWNLRCLQGRMNPVEY
SIAMEFLDPGGPMMKLVYKLQAEDYKFDFPVSYLPGPVKASIQERVLPDSPLYHNKVQFP
PTGGLGLNLALNPFEYYIFFFALSLITQKPLPVSLHVRTSDCAYFILVDRYLSWFLPTEG
SVPPPLSSSPGGTSPSPAPRTPAMSFASYGLHHTSLLKRHISHQTSVNADPASHEIWRSE
TLLQVFVEMWLHHYSLEMYQKMQSPHAKLEVLHYRLSVSSALHSPAQPSLQALHAYQESF
TPTEEHVLVVRLLLKHLHAFANSLKPEQTSPSTHSHATSPLEEFKRAAVPRFVQQKLYLF
LQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPEKQAQSSDSQPRCVSEKWAPFVQENLLM
YTKLFVGFLNRALRTDLVSPKNALMVFRVAKVFAQPNLAEMIQKGEQLFLEPELVIPHRQ
HRLFTAPTVTGSFLSPWPPAVTDASFKVKSHVYSLEGQDCKYTPMFGPEVRTLVLRLAQL
ITQAKQTAKSISDQCVESPAGHSFLSWLGFSPTDPNGLYPANDLDEMGQDSIRKTDEYLE
KALEYLRQIFRLSEAQLAQLTFALGTTQDENGKKQLPDCIVGDDGLILTPLGRYQIINGL
RRFEIEYQGDSELQPIRSYEIPSLVRALFRLSSTINRRFADQMVALCSRDDFLGSFCRYH
LTEPVLANRHLLSPVGRRQVANHARGPRLSLRFLGSYRTLLSLLLFFFVASLFCIGPLPC
TLLLVLGYLLYAMAMTLLTERGKLHHL
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatttcggcgccggttggccgaatggcggcttccattcctgaagcaagtagtg
ctaggggtcccacagtggtttcctaaggcaaccatttttgactctccacgggagactacc
atggcattccctcacctgcagcagcccagcttcttactggctagcctgaaagctgattct
ataaataagccttttgcacagaggtgccaagacttggtgaaagtcattgaggattttcca
gcaaaggagctgcacaccatcttcccatggctagtagaaagcatctttggtagcctagat
ggcatcctcattggctggaacctccgctgcctacaagggcgtatgaaccctgtggaatac
agcattgcaatggaatttctagaccctggtggcccaatgatgaagttggtttataaactc
caagctgaagactataagtttgactttcctgtctcctacctccctggccctgtgaaggca
tccatccaggaacgtgtcctccctgacagccctctgtaccacaacaaggtccaattcccc
cccacagggggccttggcctgaacctggcccttaatccatttgagtattacatattcttc
tttgccttgagcctcatcactcaaaagccactgcctgtgtccctccatgtccgtacttca
gactgtgcctatttcatcctggtagacaggtacctgtcgtggttcctgcccactgaaggc
agtgtgcctcccccactctcctccagtccaggggggaccagcccctcaccggctcccagg
acaccagccatgtcctttgcctcctatggcctccatcacaccagtcttctgaagcgacac
atctctcatcagacatctgtgaatgcagatcctgcctcccatgagatctggaggtcagaa
actctcctccaggtttttgttgaaatgtggcttcatcattactccttggagatgtaccaa
aaaatgcagtctcctcatgccaagctggaggttctccactaccgactcagtgtctccagc
gccctccacagccctgcccaacccagcctccaggccctccacgcctaccaagaatcattc
acacccactgaagagcatgtgctggttgtacgcctgctactgaagcacctacacgccttt
gccaacagcctgaagccagagcagacctccccttccacccattctcatgctaccagcccc
ctggaagaattcaaacgggccgctgtcccaaggtttgtccagcagaagctctatctcttc
ctgcagcactgtttcggccactggcccctagatgcgtccttcagagccgtcctggaaatg
tggctgagctacctgcaaccatggaggtatgcacctgagaaacaggctcaaagcagtgac
tcccagccccgatgtgtgtcagagaaatgggcaccctttgtccaggagaaccttctgatg
tataccaagttgtttgtgggtttcctgaaccgtgcactccgcacagacctggtcagcccc
aagaatgcactcatggtgttccgagtggccaaagtctttgctcagcccaacctagctgaa
atgatccaaaaaggtgagcagctattcttggagccagaactcgtcattccccaccgccag
caccggctcttcacagcccccacagtcactggcagcttcctgtcaccatggccaccagct
gtcactgatgcctcattcaaggtgaagagccatgtctacagcctggagggccaggactgc
aagtacaccccgatgtttggacctgaggtccggaccctggtcttgcgcctcgctcagctc
atcacgcaagccaaacagactgctaagtccatctctgaccagtgtgtggaaagcccagct
ggccactcattcctgtcatggctgggctttagtcccacagatccaaatggcctataccca
gccaatgacctggacgagatgggccaggacagcatccggaagacagatgagtacctagag
aaggccctggagtacctgcgccagatatttcgactcagtgaagcccagctcgcccagctc
acgtttgccctggggaccacacaggatgagaatgggaaaaagcagctcccagactgcatt
gtgggggatgatggactcatcctcacgcctctgggccgttaccagatcatcaatgggttg
cgaagatttgaaattgagtatcagggtgactcagagctacagcccatccggagctatgag
atccccagcctggtccgagcactcttcaggctgtcatccaccatcaaccgccgatttgca
gaccagatggtagctctgtgttcccgagatgacttccttggcagtttctgtcgctaccac
ctcactgagcctgtgctggctaacagacacctcctgagccccgtgggacggaggcaagtg
gccaatcatgcccgaggccccaggctcagcctacgcttcttgggcagctaccggacactg
ctctcgctcctgctctttttttttgtggcctctctattctgcattggtcccctgccctgc
accctgctccttgtcttgggatacctcctctatgccatggccatgacactcctgactgag
agagggaagttgcaccatctctga
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