Sciurus carolinensis (gray squirrel): 124990617
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Entry
124990617 CDS
T08117
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124990617
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124990617
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
124990617
NCBI-ProteinID:
XP_047416747
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Position
8:complement(78033827..78191515)
Genome browser
AA seq
968 aa
AA seq
DB search
MLTEASLSIWGWGSLGIVLFLVTFGPFVIFYLAFYILCFVGGGLVVTLLFGKTNSEKYLE
QCEHSFLPPTSTGVPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQRIT
EKDDQIKGTAEDLIDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGD
FQNKIMRYFVREILARGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTV
KLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
LSRQKDGKHQTNQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPT
GSINLSLDDLSSVSSDDTVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRRN
LNSEEMWKTYRRYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNAY
LQLLLTPEMMKASPALAHCVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
LPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLITKTDADPEHCRVSAQLDDNVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADSVKRFRDAFWPNGILAESVPCRDKAIRMRTRIAGKTKLLAIMPDELKHIIGAETTRK
GILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQYKFRELFNKLHSRSKQMQKYKQKLQTT
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagaggccagtctatccatatggggatggggaagccttggcatcgtccttttt
ctagtaacctttggaccctttgtaatattttatttggccttttatatcctctgctttgtg
ggtgggggtttagtggttactctcttgtttggaaaaacaaactcagaaaaatacctagag
cagtgtgaacactcatttcttcctccaacatcaactggggttcctaagtgcttagaagaa
atgaaacgggaagccaggactattaagatcgatagaagattgacgggtgccaatattatt
gatgaacctctccagcaagttatccagttttccttgagggattatgtccagtattggtat
tacacactaagtgatgatgaatcttttcttcttgaaattaggcagactcttcagaatgct
ctcattcagtttgctactaggtcaaaagaaatagactggcaaccttattttactacacgc
attgtagatgattttggcacgcacctacgagtattcagaaaggctcaacagagaataaca
gagaaagatgatcaaataaaaggtacagcagaagatcttatagataccttctttgaagtt
gaagttgaaatggagaaggaagtttgccgtgacctagtgtgcacttctcccaaagatgaa
gaaggattcctaagagatttgtgtgaggtcttattatatttattgctacctcctggagat
ttccagaacaagatcatgcgatactttgtcagggaaatccttgcacgaggaattcttctt
ccattaataaatcaactcagtgatcctgattatattaatcagtatgtcatatggatgatc
cgtgattcaaattgcaactatgaggcctttatgaacattattaaattgagtgacaatatt
ggagaattggaagcagttagagacaaggcagcagaagaattacagtatcttagatcttta
gatacagctggtgatgatatcaacaccattaaaaatcaaataaatagcttattatttgta
aagaaagtatgtgactcaagaatacagcggttgcagtcaggcaaagaaataaatactgtg
aaactggcagcaaactttgggaaactttgcacagtccctttggacagcattcttgtcgac
aatgttgcactacaattttttatggattacatgcagcaaactggaggtcaggcacatctt
ttcttctggatgacagtggagggctaccgggttacagcccaacaacagctagaggtttta
ttaagtcgtcagaaagatggaaaacatcaaaccaaccaaaccaaaggtcttttaagagca
gctgctgttggaatttatgaacagtatttgtctgaaaaggcatctccaagagttactgtt
gatgactatttagtagcaaaattagcagatactttgaatcatgaagatccaacccctgaa
atctttgatgacattcaaagaaaggtatatgaattgatgctacgagatgaaagattttat
ccttccttcagacaaaatgcactttatgtgcgcatgttagctgagctggacatgttaaaa
gatcctagtttcagaggatcagatgacggggatggagaatcttttaatggatctcctaca
ggaagcataaatttgtctttagatgacctttcaagtgtatcttctgatgacacagtacaa
cttcatgcttacatatcagacactgtatatgctgactatgacccatatgctgtggcagga
gtttgtaatgatcatggcaagacatatgcattatatgccatcaccgtacaccggcgcaat
ctaaacagtgaggagatgtggaagacatatcgtcgatacagtgacttccatgattttcac
atgagaattactgaacagtttgaaaatctgtcaagcatattgaagcttcctggtaaaaag
acttttaataatatggatagagattttttagaaaagagaaaaaaggatctcaatgcctat
ttgcagttactgttaactcctgaaatgatgaaagcatctccagctttggctcactgtgtc
tatgatttccttgagaacaaagcctacagtaaaggaaaaggggactttgctcgtaagatg
gacacttttgtaaatccacttcgaaattctatgaggaatgtttcaaatgcagttaaatcc
cttcctgatagtttggcagaaggaatgactaaaatgtcagacaacatgggcaaaatgtca
gaaagattaggtcaagacataaagcagtcatttttcaaggtgcctcctttaattacaaag
actgatgcagatcctgaacattgtcgagtctcagctcaacttgatgataatgtggatgac
aatattccccttagggtaatgctgcttcttatggatgaagtatttgacttaaaagagaga
aatcagtggttgcgaagaaatatcaaaaacctacttcaacagcttattagagctacatat
ggtgatactataaacagaaaaatagttgaccatgttgattggatgacctcacctgaacaa
gtagctgactcagtgaaacgtttcagagatgcattttggccaaatggcattttagcagag
tctgttccatgcagagataaagctattcgaatgagaacaagaattgcaggaaaaaccaaa
ttacttgcaattatgccagatgaactgaagcacatcattggtgctgagacaacacggaaa
ggcattcttcgtgtttttgaaatgtttcagcacaaccagttaaataggagaatggtttat
gtcttcttggaaggctttttagaaaccttatttccacagtataaatttcgtgaacttttc
aacaaactgcattcacggtcaaagcagatgcagaaatataaacagaaacttcaaactact
caagcgccttctttacaaaaaaggtga
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