KEGG   Sciurus carolinensis (gray squirrel): 124990629
Entry
124990629         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-8-like
  KO
K06591  integrin beta 8
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04151  PI3K-Akt signaling pathway
ncar04510  Focal adhesion
ncar04512  ECM-receptor interaction
ncar04514  Cell adhesion molecules
ncar04810  Regulation of actin cytoskeleton
ncar04820  Cytoskeleton in muscle cells
ncar05165  Human papillomavirus infection
ncar05410  Hypertrophic cardiomyopathy
ncar05412  Arrhythmogenic right ventricular cardiomyopathy
ncar05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    124990629
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124990629
   04514 Cell adhesion molecules
    124990629
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124990629
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124990629
   04810 Regulation of actin cytoskeleton
    124990629
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    124990629
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    124990629
   05412 Arrhythmogenic right ventricular cardiomyopathy
    124990629
   05414 Dilated cardiomyopathy
    124990629
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124990629
   04515 Cell adhesion molecules [BR:ncar04515]
    124990629
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124990629
Cell adhesion molecules [BR:ncar04515]
 Integrins
  Integrin beta subunits
   124990629
SSDB
Motif
Pfam: Integrin_beta EGF_integrin PSI_integrin EGF_2 EGF_Teneurin EGF_TEN vWA_SIBA-E
Other DBs
NCBI-GeneID: 124990629
NCBI-ProteinID: XP_047416778
LinkDB
Position
8:80363892..80450561
AA seq 767 aa
MCGLALAFFTAAFVCLQNCRRGPASFLLAAWVFSLVLGLGQSEDNRCASSDAVSCAKCLA
LGPECGWCVQEDFISGGSRSERCDIVSNLISKGCSIDSIEYPSVRVIIPSENEINTQVTP
GEVSIQLRPGAEANFMLKIHPLKKYPVDLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFF
SRDFRLGFGSYVDKTVSPYISVHPERIHNQCSDYNLDCMPPHGYIHVLSLTENITEFEKA
VHRQKISGNIDTPEGGFDAMLQAAVCESHIGWRKEAKRLLLVMTDQTSHLALDSKLAGIV
VPNDGNCHLKNNVYVKSTTMEHPSLGQLSEKLIDNNINVIFAVQGKQFHWYKDLLPLLPG
TIAGEIESKAANLNNLVVEAYKKLISEVKVQVENQVQGVYFNITAICPDGTRKPGTDGCG
NVTSNDEVLFNVTVTMKKCDVTGGXNYAKIKPIGFNETTKIHIHRHCNCQCEDHRGRKGK
CEDETFLDSKCLQCDESKCHLMKXCIPSESCRLHKDQPVCSGRGVCICGKCLCHKIKLGK
VYGKYCEKDDFSCPYHHGNLCAGHGECEAGRCQCFHGWEGDRCQCPSASSQHCVNLKGQV
CSGRGTCVCGRCECTDPRSIGRFCEHCPTCHTACSENWNCMQCLHPHNLSQAILDQCKTS
CALMDQHYGHQTSECLSSPSYLRIFFIIFIXTFLIGLLKVXIIRQVILQWNNNKISLIRY
RVSASKKDKLLLQSVCTRTVTYHREKPEEIKMDISKLNTHETFRCNF
NT seq 2304 nt   +upstreamnt  +downstreamnt
atgtgcggcttggccctggctttttttactgctgcatttgtctgcctgcaaaactgccgg
cgaggtcctgcctcatttcttctggcggcctgggtgttttcacttgttcttggactggga
caaagtgaagacaatagatgtgcatcttcagacgcagtgtcgtgtgccaagtgccttgcg
ctgggtccagaatgtggatggtgtgttcaagaggattttatttcaggtggatcaagaagc
gaacgttgtgatattgtttccaatttaataagcaaaggctgctcgattgattcgatagaa
tatccatctgtgcgtgtaatcataccaagtgaaaatgaaattaacactcaagtgacacca
ggagaagtgtcaatccagctgcgtccaggagctgaagctaattttatgctgaaaattcat
cctctgaagaaatatccggtggatctttattatctggttgatgtatcagcatcaatgcac
aataatatagaaaaattaaattccgttggaaatgatttatctagaaaaatggcatttttc
tcccgtgacttccgccttggatttggctcatatgtggataaaactgtttcaccatacata
agtgtccaccctgaaaggattcataatcaatgcagtgactacaatttagactgtatgcct
ccccacgggtatatccatgtgctgtctttgacagaaaacatcactgagttcgaaaaagcg
gttcacagacaaaagatctctggaaacatagacacccctgaaggaggtttcgacgccatg
cttcaggcagctgtctgtgagagtcatattggatggcgaaaagaagctaaaagattgctg
ctggtgatgacagatcagacatctcatcttgctcttgatagcaaattggcaggcatagtg
gtgccgaatgacggaaactgtcatctgaaaaacaatgtctacgtcaaatctacgaccatg
gaacatccctcactaggccaactttcagaaaaactgatagacaacaacattaatgtcatt
tttgcagttcaaggaaaacagtttcattggtataaggaccttctaccccttttgcctggc
accattgctggtgagatagaatcaaaggctgctaacctcaacaatttggtagtagaagcc
tacaagaaactcatttcagaagtgaaagtgcaggtggaaaaccaggtacaaggtgtctat
ttcaacatcacagccatctgtccagatggaaccagaaagccaggcactgatggatgtgga
aatgtgacaagcaatgatgaagttcttttcaatgtaacagttacaatgaaaaaatgtgat
gtcacaggagganaaaactatgcaaaaatcaaacctattggtttcaatgaaaccactaaa
attcacatacacaggcactgcaactgtcagtgtgaggaccacagaggacgtaaaggaaag
tgtgaagatgaaactttcctagactccaagtgtttgcagtgtgacgagagtaaatgccat
ttgatgaagnnatgcattccgtccgagagttgcaggttacacaaggaccaacctgtttgt
agtggtcgaggagtctgtatttgtgggaagtgtttatgtcacaaaattaagcttggaaaa
gtgtatggaaaatactgtgaaaaggatgatttttcctgtccatatcaccatggaaatctg
tgtgctgggcatggagaatgtgaagcaggcagatgccagtgcttccatggctgggaaggg
gaccggtgccagtgcccctcagcatcatcccagcactgtgtcaatttgaagggccaggtg
tgcagcggcagaggcacgtgcgtgtgcggcaggtgtgagtgcacagatccccggagcatc
ggccgcttctgtgaacactgtcccacctgtcacacggcctgcagtgaaaactggaattgt
atgcaatgccttcaccctcacaatctgtctcaagctatacttgatcagtgcaaaacctca
tgtgctctcatggaccagcattatggacatcaaacatcagaatgtttatctagcccgagc
tacttgagaatatttttcatcatattcatanttacattcttgattgggttgcttaaagtc
nctatcattaggcaggtgatactacaatggaataataataaaataagtctcatcagatac
agagtgtctgcctcaaaaaaggataagttgcttctgcaaagtgtttgcacaagaacagta
acctaccaccgtgagaaaccggaagaaataaaaatggatatcagcaaattaaatactcat
gaaactttcaggtgcaacttctaa

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