Sciurus carolinensis (gray squirrel): 124990633
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Entry
124990633 CDS
T08117
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124990633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124990633
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124990633
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
HECT type E3
124990633
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
124990633
NCBI-ProteinID:
XP_047416782
LinkDB
All DBs
Position
8:131440119..131490099
Genome browser
AA seq
1068 aa
AA seq
DB search
MFTVSQTSRAWFIDRARQAREERLVQKERERAAVEIQAHVRSFLCRCRLHRDIRREIDEF
FKADDSGSSKRSALCIFKIARKLLFLFKIKEDNERFEKLCRCILSSMDAENEPKVWYVSL
ALSKDLTLLWIKQIKDILWYCCEFLEQLKPEILQDSRLITLYLTMLVTFTDTSTWKILRG
KGENLRPAMNHICANIMGHLNQHGFYSVLQVLLTRGLARPRPCLSKGTLTAAFSLALRPV
IAAQFSDNLIRPFLIHIMSVPALVTHLSTVTPERLTVLESHDMLRKFIMFLRDRDRCRDI
CESLEGCHTLCLMGNLLQLGSLSPRVLEEETDGFVSLLTQMLCYCQKYVSQKKSNLTHWH
PVLGWFSQSVDYGLNESMSLITKQLQFLWGVPLIRIFFSDILSKKLLEHQEPPPAQPASP
QNVLPVKSLLKRAFQKSASVRNILRPVGGKRVDSAEVQQVCNICVLYQTSLTTLTQIRLQ
ILTGLTYLDDLLPKLWAFICELGPHGGLKLFLECLNNDTEESKQLLAMLMLFCDCSRHLI
TILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVENAKGETLELFQSVHGWLMV
LYERDCRRRFAPEDHWLRKDLKPSVLFQELDKDRKRAQLILQYIPHVIPHKNRVLLFRNM
VTKEKEKLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSQHAMKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQLLGHHHSIFYSSVDELPSLDSEFYKNLTSIKRYDGDI
ADLGLTLSYDEDVMGQLVCHELIPGGKTIPVTNENKISYIHLMAHFRMHTQIKNQTAALI
SGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDIL
ASDFTPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRRREPGGRLPTSSTCFNLLKLPNYSKKGVLREKLRYAVSMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttcactgtctctcagacctcgagagcgtggttcattgacagagcccgccaggcacga
gaagaaaggctggtgcagaaggagcgagagcgtgcagctgtggagattcaggcccacgtc
cggagttttctctgtcggtgtcgactgcacagagacatcaggagagagattgatgagttt
tttaaagcagatgactctgggtccagtaaaagaagtgcactttgtattttcaagattgcc
aggaaattgctgttcttgttcaaaatcaaagaggataatgagagattcgagaagttgtgt
cgttgtatcctgagcagcatggatgctgagaatgaacctaaggtgtggtacgtatccctc
gctctttccaaggatctcactctcctgtggattaaacaaatcaaggacatcctgtggtac
tgctgtgagtttcttgagcagctcaagcctgaaatcttgcaagactccagactcatcaca
ctgtacctcacgatgcttgtcaccttcacagacacttcgacgtggaaaatcctccgggga
aaaggtgagaaccttcgaccagccatgaaccacatctgtgcaaatataatgggacatctc
aaccagcatgggttttactctgtgctgcaggtattgctaacccgaggcctggccagaccc
cggccttgtctgtccaagggcaccttaacagcggccttttctctggcactgcgccctgtg
attgctgcacaattttcagacaatctgattcggccgttcctcatccacatcatgtctgtg
cctgcacttgtgactcacctcagcacggtgacccctgagcgtctcactgttttagaatct
catgacatgcttcgcaaattcatcatgtttttaagagacagagaccgatgccgggacata
tgtgaaagtttagaaggatgccacactctgtgcctgatgggcaacctcctgcagctgggc
tccctcagccccagagtgctggaggaggagaccgacggctttgtgagcttgctcacccag
atgctgtgctactgtcagaagtacgtgtcccagaagaagtccaacctgacccactggcac
cctgtcctcggctggttctcccaatctgtggattatggcctcaatgagtccatgtccttg
atcaccaaacagctgcagttcctgtggggggtgcctctcatccgcatcttcttcagtgac
atcctgagcaagaagttgttggagcaccaggagccgccccccgcccagccggcatcccca
cagaacgtgcttccagtgaagagtcttctcaagcgtgcatttcagaagtctgcctccgtt
cggaatattctcaggcctgtcgggggcaaacgcgttgattctgcagaggttcagcaggtc
tgcaacatctgtgtcctctaccagacctcgctgacgaccctcacccagatccgcctgcag
attctcacaggtctcacttaccttgatgacctgctgcccaaactgtgggcgtttatctgt
gagctggggccccacggagggttaaagctcttcttggaatgcctgaacaatgacactgaa
gagtccaagcagctcttggccatgctgatgctgttctgtgactgttcccggcacctcatc
acgatccttgatgacattgaagtttatgaagaacaaatttcattcaaactagaagagctg
gtcaccatctcctctttcctgaactctttcgtgtttaagatgatctgggatggaattgta
gagaacgccaagggtgagaccctggagctgttccagtctgtccacgggtggctgatggta
ctctacgagcgggactgccgccggcgctttgcccctgaggaccactggctgcggaaggat
ctcaaacctagtgtgctcttccaagaacttgacaaggaccgaaaacgggcacagttgatc
ctgcagtacatcccacatgtcattcctcacaaaaatagagttctcctgttccgaaacatg
gttaccaaggagaaagagaaactggggctcgtggaaaccagctccgcctcgccccatgtc
actcacataactatccgtcgttcccggatgttggaggatggctacgagcagctgcggcag
ctctcccagcatgccatgaagggcgtgatccgcgtgaagtttgtcaacgacctcggcgtg
gacgaggctgggatcgatcaggacggcgttttcaaggagttcttggaagagatcatcaag
agggtgtttgacccggcacttaacctgttcaagacgaccagtggggatgagaggctgtac
ccctcgcccacatcctatatccacgagaattacctgcagctcttcgagttcgtgggcaag
atgctggggaaggccgtgtatgagggaatcgtggtggatgtgcccttcgcctccttcttc
ctgagccagctgctcgggcaccaccatagtatcttctatagctctgtggatgaacttcct
tctctggactcggagttctataaaaacctcacctccattaagcgctatgatggggacatt
gctgatctgggcttgacactgtcatatgatgaggatgtcatgggtcagcttgtttgccat
gagctgattcctggagggaagaccattcctgttacaaatgaaaataaaatcagttacatc
catctgatggcacattttcgaatgcacacccaaatcaaaaaccagactgctgccctcatt
agtggtttccgttccattatcaaacctgagtggatccggatgttctctacccctgagctg
cagcgtctcatctccggtgacaacgcagagattgatctggaagatctaaagaagcacaca
gtgtactacggtggctttcatggaagtcacagggtcatcatctggctctgggatattctg
gcctctgatttcacacctgaggagagagccatgtttctgaagttcgtgaccagctgctcc
agacccccgctcctgggatttgcctacctcaagcctccgttctccatccgctgcgtggaa
gtgtctgatgaccaggacactggagacacgctgggcagtgtccttcggggcttcttcacc
atccgcaggcgggaacccggcggccgtctgcccacctcctccacctgcttcaacctgctc
aagctgcccaactacagcaagaaaggcgtcctgcgggagaagctgcgctacgccgtcagc
atgaacacgggcttcgagctttcctaa
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