Sciurus carolinensis (gray squirrel): 124990655
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Entry
124990655 CDS
T08117
Name
(RefSeq) ABC-type oligopeptide transporter ABCB9 isoform X1
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar02010
ABC transporters
ncar04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124990655
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124990655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124990655
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncar02000
]
124990655
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
124990655
Transporters [BR:
ncar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
124990655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
RsgA_GTPase
DUF4191
nSTAND1
AAA_30
AAA_29
MCU
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
124990655
NCBI-ProteinID:
XP_047416834
LinkDB
All DBs
Position
8:complement(147622408..147656002)
Genome browser
AA seq
766 aa
AA seq
DB search
MRLWKAVVVTLAFMSMDVSVTTAIYAFSHLDRSLLEDIRHFNIFDSVLDLWAACLYRSCL
LLGATIGVAKNSALGPRRLRASWVVITLVCLLVGIYAMVKLLLFSEVRRPIRDPWFWALF
VWTYISLAASFLLWWLLSTVRPDAEALEPGAGTEAEGFHREARPATEQASGATLQKLLSY
TKPDAAFLVAASSFLIMAALGETFLPYYTGRAIDSIVIQKSMDQFSTAVIVVCLLAIGSS
FAAGIRGGIFTLIFARLNIRLRNCLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLV
SQNINIFLRNTVKVTGVVVFMFSLSWQLSLVTFMGFPIIMVVSSIYGKYYKRLSKEVQSA
LARASNTAEETISAMKTVRSFANEEEEAEVYLRKLQQVYKLNRKEAAAYMYYVWGSGLTL
LVVQVSILYYGGHLVISGQMTSGNLIAFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVF
EFIDRQPTMVHDGDLAPDHLEGRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGP
SGSGKSSCVNILENFYPLQGGRVLLDGKPIGAYDHKYLHRVISLVSQEPVLFARSITDNI
SYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRN
PPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLIIAHRLSTVERAHLIVVLDKGRVVQ
QGTHQQLLAQGGLYAKLVQRQMLGLEPPSDYTASHKEPLGSSSHKA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcggctatggaaggcggtggtggtaacgttggccttcatgagcatggacgtcagtgtg
accacggccatctatgccttcagccaccttgaccgcagcctgctggaggacatccgccac
ttcaacatctttgactcggtgctggacctctgggcagcctgcctgtaccgcagctgcctg
ctgctgggggccaccatcggcgtggccaagaacagcgccctggggccccggcggctgcgg
gcctcctgggtcgtcatcaccctcgtgtgcctcttggtgggcatctacgccatggtcaag
ctgctgctcttctcggaagtgcgcaggcccatccgggacccgtggttctgggccctcttt
gtgtggacgtacatctcgctcgccgcctccttcctgctctggtggctgctgtccaccgtg
cggccagacgccgaggccctggagccgggggcagggactgaggccgagggcttccacagg
gaggcccggccggcgaccgagcaggcatctggggccacgctgcagaagctgctgtcctac
accaagcccgacgcggccttcctcgtggccgcctcctccttcctcatcatggcggctctc
ggcgagaccttcctgccctactacacaggccgggccattgacagcatcgtcatccagaag
agcatggatcagttcagcacggctgtcatcgttgtgtgtctgctggccatcggcagctca
tttgccgcaggtattcggggcggcatttttaccctcatatttgccagactgaacattcgc
ctccggaactgtctcttccgctcgctggtgtctcaggagacgagcttctttgacgagaat
cgcacaggggacctcatctcccgcctcacctcggacaccactatggtcagtgacctggtc
tcccagaacatcaacatcttcctgaggaacacggtcaaggtcacgggcgtggtggtcttc
atgttcagcctctcgtggcagctctccctggtcaccttcatgggcttccccatcatcatg
gtggtgtccagcatctacggcaagtactacaagagactctccaaggaggtgcagagcgcc
ctggccagagccagcaacacggccgaggagaccatcagcgccatgaagactgtccgcagc
tttgccaacgaggaggaggaggcagaggtgtacctgcggaagctgcagcaggtgtacaag
ctgaaccggaaggaggcggctgcctacatgtactacgtctggggcagcgggctcacgctg
ctggtggtccaggtcagtattctctactacggaggccacctcgtcatctcgggccagatg
accagcggcaacctcatcgccttcatcatctacgagttcgtcctgggggactgcatggag
tctgtgggctccgtctacagcggcctgatgcagggagtgggggcagcggagaaggtgttt
gagttcatcgaccggcagccgaccatggtgcacgacggtgacttggcccccgaccacctg
gagggccgagtggactttgagaacgtgaccttcacctaccgcacgcggccccacacccag
gtcctgcagaatgtctccttcagcctgtccccaggcaaggtgacggccctggtggggccc
tctggcagcgggaagagctcctgtgtcaacatcctggagaacttctaccccctgcagggg
ggccgggtgctgctggacggcaagcccatcggcgcctacgaccacaagtacctgcaccgc
gtgatctccctggtgagccaggaacccgtgctgtttgcccgctccatcacagacaacatc
tcctacggcttacccacagtgcccttcgagatggtggtggaggccgcacagaaggccaac
gcccacggcttcatcatggagctgcaggacggctacagcacagagaccggggagaagggc
gcccagctctcaggtggccagaagcagcgggtggccatggcccgggccttggtgcggaac
cctcctgtcctcatcttggatgaggccaccagtgccctggatgccgagagcgagtacctg
atccagcaggccatccacggcaacctgcagaagcacacggtgctcatcatcgcgcaccgc
ctgagcaccgtggagagggcacacctcatcgtggtgctggacaagggccgcgtggtgcag
cagggcacgcaccagcagctgctggcccagggcggcctctacgccaagctggtgcagcgc
cagatgctggggctcgagcccccctcggactacacggccagccacaaggagccactgggc
agcagcagtcacaaggcttga
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