Sciurus carolinensis (gray squirrel): 124990727
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Entry
124990727 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: GATOR complex protein DEPDC5-like
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
124990727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124990727
Membrane trafficking [BR:
ncar04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
124990727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
124990727
NCBI-ProteinID:
XP_047416964
LinkDB
All DBs
Position
8:115948476..116093930
Genome browser
AA seq
1602 aa
AA seq
DB search
MRTTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSIDEFPEINQA
SIRQDHKGRFYEDFYKVVAQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPQGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSAPRDSRLGDDYNIPHWINHSFYTSKSQLFCNSFT
PRIKLAGKKPASEKAKNGRDTSLGTPKESENALPIQVDYDAYDAQVFRLPGPSRAQRLAT
CRSVRERESHSRKSASSCDVSSSPSLPSRALPTEEVRSQASDDSSLGKSANILMIPHPHL
HQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGQRDPTHSSAELLE
LAYHEAAGRHSTSRQPGDGMSFLNFSGTEELSVSLLSNSGAGMNPRIQNKDSLEDNVSTS
PDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPE
ADLDRRDEDGVQMTAQQVFEEFICQRLMQGYQIIVQPKAQKPNPAVPPPLSSSPLYSRGD
ALCPRNRPEEEDQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESTQIHYTYSLCPSHSD
SEFVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKR
ITEGEVHCDIYGDRPRADEDEWQLLDGFIRFVEGLNRIRRRHRSDRMMRGTTMKGLQMTG
PISTHSLESTGPTAGKKTSALSALLEMEASQKCLGEQQAALHSGKSSTQSAESSVAMTPT
YVDSPRKDGAFFMEXVRSPRTASSAFYPQVSLDQTVTPVLDSTSLGVSTGQSVDRGNSQT
FGNAQNIGEQAFLSANSSDSSSQQQAASSLTSSSTLVEILEAMKHPSTGVQLLSEQKGLS
PCCFISAEVVHWLMNNVDGVQTQAMAIDIMQKMLEEQLIMHASGEAWRTFIYGFYFYKIV
MDKEPDRVAMQQPTATWHTAGVDDFASFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRPA
SYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLN
AAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFI
PLNISCLLKEGSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQDKYSASAFNFPAENKPQ
YIHVTGTVFLQLPYSKRKFSGQQRRRRNSTSSTNQNMFCEERVGYNWAYNTMLTKTWRSS
ATGDEKFADRLLKDFTDFCINRDNRLVMFWTSCLEKMHASAP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaacaaaggtctataaactggtcatccacaagaagggctttgggggcagtgat
gatgagctagttgtgaaccccaaagtatttcctcacatcaagcttggagacattgtggag
attgctcaccccaatgacgaatacagccctctgcttttgcaagtcaagtcacttaaggaa
gatttacaaaaagaaactatcagtgtggaccagactgtaactcaagtgttccggctaaga
ccttatcaagacgtatatgtgaatgttgtagaccctaaagatgtgacccttgacctagtg
gaattaacttttaaggatcaatacattggccgaggggatatgtggcgactaaagaaaagt
ttggtcagcacatgtgcctatatcacccagaaggtggaatttgctggcatcagagcacag
gctggtgagctgtgggtcaagaatgagaaggtcatgtgtggttatatcagtgaagatacc
agggtggtgttccgttctacgtcggctatggtttacatatttattcagatgagctgtgaa
atgtgggattttgatatttatggggatctgtattttgagaaagctgtgaatggtttcctt
gctgatttatttaccaagtggaaggagaagaactgcagtcatgaagtgacagtggtcctg
ttttctagaactttctatgatgcaaaatctattgatgaatttcctgaaataaatcaggcc
tcaattcgacaggatcataaagggcgattctatgaagacttttacaaagtggtggcacag
aatgagagaagagaagaatggacttcacttctagtgaccattaaaaagctcttcatccag
tatccagttttggtgcgactggaacaggcagagggctttcctcaaggagataactctacc
tcagcacaaggaaactacctagaggccatcaatctgtcattcaatgtgtttgacaagcac
tatatcaaccgcaactttgaccgaacggggcagatgtctgtggtgatcacgcctggggtg
ggtgtctttgaagtggaccgcctactcatgattttgaccaagcagcggatgatagataat
ggaattggtgtggacttggtgtgtatgggagagcaaccgttacatgctgtcccattgttc
aagctacacaatcggagtgctcctagagattctcgactgggtgatgactataatattcct
cactggataaatcacagtttctacacatccaaaagccagctcttttgtaacagtttcacc
ccacgaattaaactggccggaaagaagcctgcctctgagaaagcaaaaaatggccgtgat
acatctcttgggactccgaaagaatctgagaatgcccttcccatccaagtcgattatgat
gcctatgatgctcaagtgttcaggctgcctggcccatcccgggctcagcgcctcgccaca
tgcaggtctgttcgagagcgggagagtcacagtcgtaagagtgccagctcttgtgatgtc
tcatccagtccttccctcccaagccgtgcactacccactgaggaagtgagaagccaggct
tctgacgacagctccctgggcaagagtgccaacatcctgatgattccacacccccatctg
caccagtatgaagtcagcagttccttgggctacaccagcactcgagatgtcctggagaac
atgatggagccaccacagcgggactccagtgcaccagggaggttccatgtaggcagtgca
gagtccatgctacatgttcgacctggtggatacacaccccagcgagcgctgattaaccct
tttgccccctcacggatgcccatgaagctcacctccaatagaaggcgttggatgcacact
tttcctgtgggaccatctggagaggccattcaaatccatcatcagacccggcagaatatg
gcggagctgcaaggcagtgggcagagggatccaactcactcctctgcagagcttttggag
ttagcatatcatgaagctgctggaaggcacagcacttcccgccagcctggtgacggcatg
tccttcttgaacttcagtggaacagaagaactttctgtcagcctgcttagcaacagtggt
gcaggtatgaatcctaggattcagaataaggattctctagaggacaatgtttctacctct
ccagaccccattctgacactgtctgctccccctgtagtgccaggcttctgttgcacagtt
ggagtggactggaagtctctcactactccggcatgcctccccctcaccaccgactacttc
cctgaccgccagggcctgcagaatgactacacagaaggctgctatgatcttctaccagaa
gcagacctggacaggagggatgaggatggtgtgcagatgacagcccagcaggtgtttgaa
gagttcatttgccagcgcctcatgcagggttaccaaatcatagtgcagcccaaggcacag
aaacccaaccctgctgtcccacccccgttgagcagtagcccactctatagtcgaggtgat
gccttgtgtccccgaaaccgccctgaggaggaggaccagtattggttgagtatgggcaga
actttccacaaagtgacactgaaggacaagatgatcacagtaactcgataccttcccaag
tatccttatgaatccacccagatccactatacctacagcctgtgcccttcacactcagat
tcagagtttgtctcctgttgggtggaattctctcatgagcgactagaggagtacaagtgg
aattacttagatcagtatatttgttctgcgggctctgaggatttcagcttaattgagtct
ctgaagttctggaggacccgcttcctgcttctgccggcctgtgtcacagccaccaagcgc
atcacagagggggaggtccactgtgacatctatggggatagaccccgtgcagatgaggat
gagtggcagctcctggatggctttattcgctttgtggagggcttgaaccggatccgcagg
cggcatcgctcagatcgcatgatgcgggggaccaccatgaaaggcttgcagatgactggg
cccatttccacacactcccttgagtcaacaggccccactgctgggaagaaaacctcggct
ctctctgccttgctggagatggaggccagtcagaagtgcctgggagaacagcaggcagct
ctgcacagtggaaaaagctctacccaatcagctgaaagcagtgttgccatgactcccacc
tatgtggacagcccacgaaaggacggggccttctttatggagnttgtccgcagcccacgc
acagcatcgtctgccttctaccctcaggtatctctggaccaaactgtcactccggtgttg
gatagcaccagtttgggggtaagcacaggtcaatctgtggacagaggcaacagccagacc
tttgggaacgctcagaacataggagaacaggcctttctgtctgcaaactctagtgacagc
agctctcagcaacaggcagcaagctctttgacatcatcttccaccctggtggaaatcctg
gaagccatgaagcacccctcgacaggagttcagttgctctctgaacagaagggcctttca
ccatgctgctttatcagtgctgaggtggtgcactggctgatgaacaacgtggatggggtc
cagacacaggcaatggccatcgacatcatgcagaaaatgctggaagagcagctcatcatg
catgcgtctggtgaagcctggcggaccttcatctatggcttctatttctacaagatagta
atggacaaagagcctgaccgagtggccatgcagcaacccactgccacctggcacactgca
ggtgtggatgactttgccagcttccagcgcaagtggtttgaggtggcctttgtggcagaa
gagctcttacactctgagattccagccttcctcttgccctggctacccagccggccagcc
tcctatgcaagcaggcatagctcctttagccgcagttttggaggacggagccaggcagct
gcacttttagctgccactgtcccagagcagagaactgtgaccctggatgttgatgtgaac
aaccggacagaccggctagaatggtgcagctgttactaccatggtaacttctccctgaat
gcagcctttgagatcaagctacactggatggcagtgactgccgctgtgctctttgagatg
gtccaaggttggcatcgaaaagctacttcctgtggctttttgttggtaccagtattggag
ggtccttttgcactgcccagctacctgtatggtgatccccttcgagcccagctcttcatc
ccgctcaatatcagctgcttgctcaaggagggcagtgaacacctatttgatagctttgaa
ccagaaacatattgggatcgaatgcaccttttccaggaagccattgcacacaggtttgga
tttgtacaagataaatattctgcctctgcatttaacttccctgctgagaacaagcctcag
tatatccatgttacaggaacagtgtttctgcagctgccctactccaagcgcaagttctca
gggcagcagcggcggcggcgcaactccaccagctccaccaaccaaaacatgttctgtgag
gagcgggttggctataactgggcctacaacaccatgcttaccaagacttggcgctctagc
gccacaggggatgagaagtttgcagatcgtctgctgaaggacttcacagatttctgcatc
aaccgtgacaaccgactggttatgttctggacaagttgcttggaaaagatgcacgctagt
gccccataa
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integrated database retrieval system
