Sciurus carolinensis (gray squirrel): 124990736
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Entry
124990736 CDS
T08117
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 3 isoform X1
KO
K13197
insulin-like growth factor 2 mRNA-binding protein 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124990736
03041 Spliceosome [BR:
ncar03041
]
124990736
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124990736
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124990736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
RRM_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_NusA_2nd
KH_PNO1_2nd
KH_NusA_1st
MOEP19
KH_Vigilin
KH_DEAH11
YbfN
Motif
Other DBs
NCBI-GeneID:
124990736
NCBI-ProteinID:
XP_047416980
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All DBs
Position
8:complement(82994977..83136418)
Genome browser
AA seq
579 aa
AA seq
DB search
MNKLYIGNLSENAAPSDLESIFKDAKIPVSGPFLVKTGYAFVDCPDESWALKAIEALSGK
MELHGKPIEVEHSVPKRQRIRKLQIRNIPPHLQWEVLDSLLVQYGVVESCEQVNTDSETA
VVNVTYSSKDQARQALDKLNGFQLENFTLKVAYIPDETAAQQNPSQQPRGRRGLGQRGSS
RQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAA
EKSITILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLK
KIEQDTDTKITISPLQELTLYNPERTITVKGNVETCAKAEEEIMKKIRESYENDIASMNL
QAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAI
IGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQGRIYGKIKEENFV
SPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKIT
GHFYACQVAQRKIQEILTQVKQHQQQKALQTGPPQSRRK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactgtatatcggaaacctcagcgagaacgccgccccttcggacctagaaagt
atcttcaaggacgctaaaatcccggtgtcgggtcccttcctggtgaagacgggctacgcg
ttcgtggactgcccggacgagagctgggccctcaaggccatcgaggcgctttcaggtaaa
atggaactgcacgggaaacccatagaagttgaacactcggtccccaagaggcaaaggatt
cggaaacttcagatacgaaatatcccgcctcatttgcagtgggaggtgctggatagttta
ctagtccagtatggagtggtggagagctgtgagcaagtgaacactgactcggaaactgca
gtggtaaatgtaacctattccagtaaggaccaagctagacaagccttagacaaactgaac
ggattccagttagagaacttcaccttgaaagtcgcctacatccctgatgaaacagctgcc
cagcaaaacccctcccagcagccccgaggacgccgtgggcttgggcagaggggctcatca
agacaggggtccccaggatcagtgtccaagcagaaaccatgtgacttgcctctgcgcctc
ctggttcccacccagtttgttggagccattataggaaaagaaggtgctaccatccggaac
atcaccaaacagacccagtctaaaattgatgtccatcgtaaagagaatgcaggggctgct
gagaagtcaattacgatactctcaactcctgaaggcacctctgcggcttgtaagtctatt
ctggagattatgcataaggaagcgcaagatataaaattcacagaagagatccccttgaag
attttagcccataataactttgtaggccgtcttattggtaaagaaggaagaaaccttaaa
aaaattgagcaagatacagacactaaaatcacaatatctccattgcaggaattgacgctg
tataatccggaacgcaccattacagttaaaggcaatgttgaaacgtgtgccaaagctgag
gaagagataatgaagaaaatcagggagtcttatgaaaatgatattgcttctatgaatctt
caagcacatttaattcctggattaaatctgaatgccttgggtctgttcccacccacttca
gggatgccacctcccacctcagggcccccttcagctatgactcctccctacccacagttt
gagcaatcagaaacggagactgtacatctgtttatcccagctctttcagtcggcgccatt
attggcaagcagggccagcacatcaaacagctttctcgatttgcaggagcttcaattaag
atcgctccagctgaagcaccagatgctaaagtgaggatggtgattatcaccggaccacca
gaggctcagttcaaggctcagggaagaatttatggaaaaattaaagaagaaaactttgtt
agtcctaaagaggaggtgaaacttgaagctcatatcagagtgccatcctttgctgctggc
agagttattggaaaaggaggcaaaacggtgaatgaactccagaatttgtcaagtgctgaa
gttgttgtcccccgtgaccagacacctgatgagaatgaccaagtggtcgtcaaaataact
ggtcacttttatgcttgccaggttgcccagagaaaaattcaggaaattctgactcaggta
aagcagcaccaacagcaaaaagctctgcaaactggaccacctcagtcaaggcggaagtaa
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