KEGG   Sciurus carolinensis (gray squirrel): 124990770
Entry
124990770         CDS       T08117                                 
Name
(RefSeq) synaptobrevin homolog YKT6
  KO
K08516  synaptobrevin homolog YKT6
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04130  SNARE interactions in vesicular transport
ncar04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    124990770
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124990770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124990770
Membrane trafficking [BR:ncar04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    124990770
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 124990770
NCBI-ProteinID: XP_047417082
LinkDB
Position
8:102115844..102128825
AA seq 198 aa
MKLYSLSVLYKSEPKAILLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSAKGSRASVK
EQEYLCHVYVRNDNLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDSITWPVGSPATIQY
TALDGHLSRYQNPREADPMCKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQ
SKAFYKTARKQNSCCAIM
NT seq 597 nt   +upstreamnt  +downstreamnt
atgaagctgtacagcctcagtgtcctctacaaaagtgagcccaaagcaatactgctcaaa
gccgcttacgacgtatcttctttcagtttcttccagaggtccagtgttcaggaattcatg
accttcacaagtcaactaattgtggagcgctcagcgaaaggcagcagagcttctgtcaaa
gaacaagaatatctgtgccatgtctatgtccggaatgacaatcttgcaggcgtcgttatt
gctgacagtgaatacccatcccgggtggcctttaccttgctggagaaggtactagatgaa
ttctccaagcaggttgacagtataacttggccagtaggatcccctgctacaatccagtac
acagccctggatggtcaccttagtagataccagaacccccgagaagctgatcccatgtgt
aaagtacaggccgaactagatgagaccaaaatcattctgcataataccatggagtctttg
ttagaacgaggcgagaagcttgatgacttggtgtccaaatcagaagtactgggaacacag
tccaaagccttctataaaactgcccggaaacaaaattcatgctgtgcaatcatgtga

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