Sciurus carolinensis (gray squirrel): 124990770
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Entry
124990770 CDS
T08117
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04130
SNARE interactions in vesicular transport
ncar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124990770
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124990770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124990770
Membrane trafficking [BR:
ncar04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
124990770
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
124990770
NCBI-ProteinID:
XP_047417082
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Position
8:102115844..102128825
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AA seq
198 aa
AA seq
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MKLYSLSVLYKSEPKAILLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSAKGSRASVK
EQEYLCHVYVRNDNLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDSITWPVGSPATIQY
TALDGHLSRYQNPREADPMCKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQ
SKAFYKTARKQNSCCAIM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtacagcctcagtgtcctctacaaaagtgagcccaaagcaatactgctcaaa
gccgcttacgacgtatcttctttcagtttcttccagaggtccagtgttcaggaattcatg
accttcacaagtcaactaattgtggagcgctcagcgaaaggcagcagagcttctgtcaaa
gaacaagaatatctgtgccatgtctatgtccggaatgacaatcttgcaggcgtcgttatt
gctgacagtgaatacccatcccgggtggcctttaccttgctggagaaggtactagatgaa
ttctccaagcaggttgacagtataacttggccagtaggatcccctgctacaatccagtac
acagccctggatggtcaccttagtagataccagaacccccgagaagctgatcccatgtgt
aaagtacaggccgaactagatgagaccaaaatcattctgcataataccatggagtctttg
ttagaacgaggcgagaagcttgatgacttggtgtccaaatcagaagtactgggaacacag
tccaaagccttctataaaactgcccggaaacaaaattcatgctgtgcaatcatgtga
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