Sciurus carolinensis (gray squirrel): 124990771
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Entry
124990771 CDS
T08117
Name
(RefSeq) eukaryotic initiation factor 4A-II-like
KO
K03257
translation initiation factor 4A
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124990771
03012 Translation factors [BR:
ncar03012
]
124990771
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124990771
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124990771
mRNA cycle factors
Stress granule specific factors
124990771
Translation factors [BR:
ncar03012
]
Eukaryotic type
Initiation factors
eIF-4
124990771
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124990771
Exosomal proteins of bladder cancer cells
124990771
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
124990771
NCBI-ProteinID:
XP_047417083
LinkDB
All DBs
Position
8:complement(69442979..69445416)
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AA seq
407 aa
AA seq
DB search
MSGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQ
QRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKV
ILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMF
VLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE
ELTLEGIKQFYINVEREEWKLDTLCDLYEILTITQAVIFLNTRRKVDWLTEKMHARDFTV
SALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR
IGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggctccgcggattataacagagaacatggaggcccagagggaatggacccc
gatggtgtcatcgagagcaactggaatgagattgttgataactttgatgatatgaattta
aaggagtctcttcttcggggcatctatgcttatggttttgagaagccttcagctattcag
cagagagctattattccctgtattaaagggtatgatgtgattgctcaagctcagtcaggt
actggcaagacagccacatttgctatttccatcctgcaacagttggagattgagttcaag
gagacccaagcactagtattggcccccaccagagaactggctcaacagatccaaaaggtg
attctggcacttggagactatatgggagcaacttgtcatgcctgcattggtggaacaaat
gttcgaaatgaaatgcaaaaactgcaggccgaagcaccacatattgttgttggtacacca
gggagagtgtttgatatgttaaatagaagatacctttctccaaaatggatcaaaatgttt
gttttggacgaagcagatgaaatgttgagccgagggtttaaggatcaaatctatgagatt
tttcaaaaattaaatacaagtattcaggttgtgttgctttctgccacaatgccaactgat
gtgttggaagtgaccaaaaaatttatgagagatccaattcgaattctggtgaagaaggaa
gaattgacccttgaaggaatcaaacaattttacattaatgttgaaagagaggaatggaag
ttggacacactttgtgacttgtacgagatactgaccattacacaggctgttatttttctc
aatacaaggcgcaaagtggactggctcacagagaaaatgcacgccagggacttcacagtt
tctgctctgcatggtgacatggaccagaaagagagagatgttatcatgagagaattccga
tcagggtcaagccgagttctgatcactactgacttgttggctcgtgggattgatgtacaa
caagtgtctttggttataaactatgatctacctaccaatcgtgaaaactatattcacaga
attggcagagggggtcgatttgggaggaaaggtgtggctataaactttgttactgaagaa
gacaagaggattcttcgtgacattgagactttctacaatactacagtggaggaaatgccc
atgaatgtggctgaccttatttaa
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