Sciurus carolinensis (gray squirrel): 124990849
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Entry
124990849 CDS
T08117
Name
(RefSeq) plexin-A4
KO
K06820
plexin A
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124990849
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
PSI
Sema
TIG_plexin
PSI_PlexinA-B
PSI_integrin
DUF948
Motif
Other DBs
NCBI-GeneID:
124990849
NCBI-ProteinID:
XP_047417262
LinkDB
All DBs
Position
8:21949182..22382486
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AA seq
1893 aa
AA seq
DB search
MKAMPWNWTCLLSHLLMVGMGSSTLLPRQPPPLTQKRSFVTFRGEPTEGFNHLVVDERTG
HIYLGAVNRIYKLSSDLKVLVTHQTGPDEDNPKCYPPRIVQTCNEPLTTTNNVNKMLLID
YKENRLIACGSLYQGICKLLRLEDLFKLGEPFHKKEHYLSGVNESGSVFGVIVSYSNLDD
KLFIATAVDGKPEYFPTISSRKLTKNSEADGMFAYVFHDEFVASMIKIPSDTFTVIPDFD
IYYVYGFSSGNFVYFLTLQPEMVSPPGSTTKEQVYTSKLVRLCKEDTAFNSYVEVPIGCE
RSGVEYRLLQAAYLSKAGAVLGRTLGVRPDDDLLFTVFSKGQKRKMKSLDESALCIFILK
QINDRIKERLQSCYRGEGTLDLAWLKVKDIPCSSALLTIDDNFCGLDMNAPLGVSEMVRG
IPVFTEDRDRMTSVIAYVYKNHSLAFVGTKSGKLKKIRVDGPRGNALQYETVQVVDPGPV
LRDMAFSKDHEQLYIMSERQLTRVPVESCGQYRSCGECLGSGDPHCGWCVLHNTCTRKER
CERSREPRRFASEMKQCVRLTVHPNNISVSQYNVLLVLETYNVPELSAGVNCTFEDLSEM
DGLVVGNQIQCYSPAAKEVPRIITENGDHHVVQLQLKSKETGMTFASTSFVFYNCSVHNS
CLSCVESPYRCHWCKYRHVCTHDPKTCSFQEGRVKLPEDCPQLLRVDKILVPVEVIKPIT
LKAKNLPQPQSGQRGYECILNIQGSEQRVPALRFNSSSVQCQNTSYSYEGMEINNLPVEL
TVVWNGHFNIDNPAQNKVYLYKCGAMRESCGLCLKADPDFECGWCQSPGQCTLRQHCPAH
ESRWLELSGANSKCTNPRITEIIPVTGPREGGTKVTIRGENLGLEFRDIASHVKVAGVEC
SPLVDGYIPAEQIVCEMGEAKPSQHAGFVEICVAVCRPEFMARSSQLYYFMTLTLSDLKP
SRGPMSGGTQVTITGTNLNAGSDVVVMFGKQPCLFHRRSPSYIICNTTSSEEVLEMEVTV
QVDRAKIRRDLVFQYVEDPTIVRIEPEWSIVSGNTPIAVWGTHLDLIQNPQIRAKHGGKE
HINICEVLNATEMTCQAPALALGPDHQSDLTERPEEFGFILDNVQSLLILNKTNFTYYPN
PVFEAFGPSGILELKPGTPIILKGKNLIPPVAGGNVKLNYTVLVGEKPCTVTVSDVQLLC
ESPNLIGRHKVMARVGGMEYSPGMVYIAPDSPLSLPAIVSIAVAGGLLIIFIVAVLIAYK
RKSRESDLTLKRLQMQMDNLESRVALECKEAFAELQTDIHELTSDLDGAGIPFLDYRTYT
MRVLFPGIEDHPVLRDLEVPGYRQERVEKGLKLFAQLINNKVFLLSFIRTLESQRSFSMR
DRGNVASLIMTVLQSKLEYATDVLKQLLADLIDKNLESKNHPKLLLRRTESVAEKMLTNW
FTFLLYKFLKECAGEPLFSLFCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIEYRTLV
LSCVSPDNANGPEVPVKILNCDTITQVKEKILDAIFKNVPCSHRPKAADMDLEWRQGSGA
RMILQDEDITTKIENDWKRLNTLAHYQVPDGSVVALVSKQVTAYNAVNNSTVSRTSASKY
ENMIRYTGSPDSLRSRTPMITPDLESGVKMWHLVKNHEHGDQKEGDRGSKMVSEIYLTRL
LATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADRHGIHDPHVRHTWKSN
CLPLRFWVNMIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYA
KDIPSYKNWVERYYSDIGKMPAISDQDMNAYLAEQSRLHMSEFNTMSALSEIFSYVGKYS
EEILGPLDHDDQCGKQKLAYKLEQVITLMSLDS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccatgccttggaactggacttgcctgctctcccacctcctgatggtagggatg
ggctcctccactctcctcccccgacagccacccccgctgacccagaagcggtcctttgtc
actttccgaggagagcccactgagggcttcaatcacctggtggtggacgagaggacaggg
cacatttacttgggggccgtcaacaggatctataagctttccagtgacctgaaggtcttg
gtgacccaccagactgggccggatgaggacaaccccaagtgctacccgccccgcattgtc
cagacctgcaatgagcctctgaccaccaccaacaatgtcaacaaaatgctcctcatagac
tacaaggagaaccggctgattgcttgcgggagcctgtaccagggcatctgcaagctcctg
aggttggaggacctctttaagttgggggagccttttcacaagaaggagcactacctgtcg
ggggtcaatgagagcggctcggtctttggagtgatcgtctcctacagcaacctggatgac
aagctcttcattgccacggcagtggatgggaaacctgagtattttcctaccatctccagc
cggaagctgaccaagaactccgaggcggatggcatgtttgcttatgtcttccatgatgag
tttgtggcttccatgatcaagatcccctcggacaccttcaccgtcatccctgactttgat
atctactacgtctatggtttcagcagtggcaactttgtctactttttgacccttcagcct
gagatggtgtctcccccaggctccaccacaaaggaacaggtgtatacttccaagctcgtg
cggctttgcaaggaggacacagccttcaattcctacgtggaggtgcccatcggctgtgag
cgcagcggggtggaataccgcttgctgcaggccgcctacctgtccaaagctggggctgtg
ctgggccggaccctgggggtccgtccggatgatgacctcctcttcactgtcttctccaag
ggccagaagcggaagatgaagtctctggatgagtcagccctctgcatctttatcctgaag
cagatcaatgaccgcattaaggagcggctgcagtcctgctaccggggcgagggcacgctg
gacctggcctggctcaaggtgaaggatatcccctgcagcagcgcgctcttaaccattgat
gacaacttctgtggcctggatatgaatgcccccctgggagtgtccgagatggtgcgaggc
attcctgtcttcaccgaggacagggaccgcatgacttccgtcattgcatatgtctacaag
aatcactctctggccttcgtgggcaccaagagtggcaagctgaagaagatccgggtggat
ggacccaggggcaatgccctgcagtacgagacagtgcaggtggtagaccctggccccgtc
ctccgcgacatggccttctccaaggaccacgagcaactctacatcatgtcagaaaggcag
ctcaccagagtgcccgtggagtcctgcggtcagtatcggagctgtggggagtgccttggc
tccggtgatccccactgtggctggtgtgtgctccataacacgtgcacccggaaggagcgg
tgtgagcggtccagggagccccgcaggtttgcctcagagatgaagcagtgtgtccgactg
acagttcatcccaacaacatctccgtctctcagtacaatgtgctgctggtcctggagaca
tacaatgtcccggagctgtcagctggcgtcaactgcacctttgaggacctgtcagagatg
gatgggctggtggtaggcaatcagatccagtgctattcccctgcagccaaggaggtgccc
cggatcatcacagagaacggagaccaccatgttgtacagcttcaactcaagtcgaaggag
acaggcatgaccttcgccagcaccagctttgtcttctacaactgcagcgtccacaattcg
tgcctgtcctgcgtggagagtccgtaccgctgccactggtgtaaatacaggcacgtctgc
acccacgaccccaagacttgctccttccaggaaggccgagtgaagctgcccgaggactgc
ccccagctgctgcgagtggacaagatcctggtacccgtggaggtgatcaagcccatcact
ctgaaggccaagaaccttccgcagccccagtctgggcagcgtggctacgagtgcatcctg
aacatccagggcagcgagcagagggtgcccgccctgcgcttcaacagctccagcgtgcag
tgccagaacacctcctattcctatgaagggatggagatcaacaacctgcccgtggagttg
acggtcgtgtggaatgggcacttcaacattgacaacccagctcagaacaaagtctacctc
tacaagtgcggagccatgcgtgagagctgcgggctgtgcctcaaggcagacccagacttc
gagtgcggctggtgccagagtccaggccagtgcaccctgcgccaacactgccctgcccac
gagagccgctggctggagctgtcaggcgccaatagcaagtgcaccaacccccgcatcacg
gagataatcccagtgacaggcccccgggaagggggcaccaaggtcaccatccgaggagag
aacctgggcctggaattccgggacatcgcctcccatgtcaaagtggctggcgtagagtgc
agccccttggtggacggctacatccctgcagaacagatcgtgtgtgagatgggagaggcc
aagcccagccagcacgcaggcttcgtggagatctgtgtggcggtgtgtcggccggagttc
atggcccgctcctcccagctctactacttcatgacactgaccctctcagaccttaagccc
agccgggggcccatgtccgggggcacgcaggtgaccatcacgggcaccaacctgaatgca
ggcagtgacgtggtggtgatgtttggaaagcagccctgcctcttccacaggcggtctcca
tcctacatcatctgcaacaccacgtcctcagaggaggtgctggagatggaggtgacggtg
caggtggacagggccaagatccgccgggacctggtcttccagtacgtggaggaccccacc
atcgtgcgcatcgagcccgagtggagcatcgtcagtggaaacacacccatcgctgtctgg
gggactcacctggacctcatacagaacccccagatccgtgccaagcatggcgggaaggag
cacatcaacatctgtgaggttctgaatgcgaccgagatgacctgccaggctccagccctg
gccctgggtcccgaccaccagtcggacctcaccgagaggcctgaggaatttggcttcatc
ctggacaatgtccagtccctgctaatcctcaacaagaccaacttcacctactaccccaac
cctgtgtttgaggcctttggtccatcaggaatcctggagctcaagcccggtacccccatc
atcctaaagggcaagaacctgatcccacccgtggctgggggcaacgtgaagctgaactac
accgtgctggtgggggagaagccgtgcaccgtgaccgtgtcggacgtgcagctgctctgc
gagtcccccaacctcatagggaggcacaaagtgatggcccgcgtcggcggcatggagtac
tccccggggatggtgtacatcgctcccgacagcccgctcagcctgccggccatcgtgagc
atcgcagtggccggcggcctcctcatcatcttcatcgtggctgtgctcatcgcttacaaa
cgcaagtcgcgggagagcgacctcacactgaagaggctgcagatgcagatggacaacctg
gagtcccgcgtggcactggagtgcaaggaagcctttgctgagttgcagacagatatccat
gagctgaccagtgacctggatggagctgggatccccttcctagactacagaacctacacc
atgcgagtgctgttcccaggaattgaagaccaccctgtgctccgggacctcgaggtcccg
ggctaccggcaggagcgggtggagaaaggtctgaagctgtttgcacagctcatcaacaac
aaggtgttcctgctgtccttcatccgcacgcttgagtcccagcgcagcttctccatgcgc
gaccgtggcaacgtggcctcgctcatcatgaccgtgctgcagagcaagctggagtacgcc
accgacgtgctgaagcagctgctggccgacctcatcgacaagaacctggagagcaagaac
caccccaagctgctgctcaggaggacggagtcggtggctgagaagatgttgaccaattgg
ttcactttcctcctctacaagttcctcaaggagtgcgctggggagcccctcttctccctg
ttctgtgccatcaagcaacagatggagaagggccccatcgatgccatcacgggcgaggcc
cgctactccctgagtgaggacaagctcatccggcagcagatcgagtacaggaccctggtc
ttgagctgtgtcagtccagacaatgccaacggccctgaggtcccagtgaagatcctcaac
tgtgacaccatcactcaggtcaaagagaagattctggatgccatctttaagaatgtgccc
tgttcccaccggcccaaggctgcagacatggacctcgagtggagacaaggaagcggggca
agaatgatcctgcaggatgaagacatcaccaccaagatcgagaacgactggaagagactg
aacaccctggcccattaccaggtgccggatggttccgtggtagctttagtgtccaagcag
gtgacggcttataatgcagtgaacaactccacggtctccaggacctcggcgagtaaatac
gaaaacatgatccggtacacaggaagccccgacagcctccgctcacggacacccatgatc
acccccgacctggagagcggagtcaagatgtggcatctggtgaagaaccatgagcatggg
gaccagaaggagggtgaccgggggagcaagatggtctctgagatctacctgacacgcctt
ctggccactaagggcactctgcagaagtttgtggacgacctcttcgagaccatcttcagc
acggcccaccggggctccgccctgcccctggccatcaagtacatgttcgacttcctggat
gagcaggcggacaggcatggcattcacgacccgcacgtgcgccacacctggaagagcaac
tgcctgcccctgcggttttgggtcaacatgatcaagaacccgcagttcgtgtttgacatc
cataagaacagcatcacggacgcctgcctctctgtggtggcccagaccttcatggactcc
tgctccacatcggagcaccgactgggcaaggactcgccctccaataagctgctttatgcc
aaggacatccccagctacaagaactgggtggagaggtattactcagacatcgggaagatg
ccggccatcagtgaccaagacatgaacgcatacctggcggaacagtcccggctgcacatg
agcgagttcaacaccatgagcgcgctctcggagatcttctcctacgtgggcaagtacagt
gaggagatccttggacctctggaccatgatgaccagtgtggcaaacagaaattggcctac
aaactagaacaagtcataaccctcatgagcttagacagctga
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