KEGG   Sciurus carolinensis (gray squirrel): 124990878
Entry
124990878         CDS       T08117                                 
Name
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04145  Phagosome
ncar04210  Apoptosis
ncar04530  Tight junction
ncar04540  Gap junction
ncar04814  Motor proteins
ncar05010  Alzheimer disease
ncar05012  Parkinson disease
ncar05014  Amyotrophic lateral sclerosis
ncar05016  Huntington disease
ncar05020  Prion disease
ncar05022  Pathways of neurodegeneration - multiple diseases
ncar05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124990878
  09143 Cell growth and death
   04210 Apoptosis
    124990878
  09144 Cellular community - eukaryotes
   04530 Tight junction
    124990878
   04540 Gap junction
    124990878
  09142 Cell motility
   04814 Motor proteins
    124990878
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124990878
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124990878
   05012 Parkinson disease
    124990878
   05014 Amyotrophic lateral sclerosis
    124990878
   05016 Huntington disease
    124990878
   05020 Prion disease
    124990878
   05022 Pathways of neurodegeneration - multiple diseases
    124990878
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124990878
   03036 Chromosome and associated proteins [BR:ncar03036]
    124990878
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ncar04812]
    124990878
   04147 Exosome [BR:ncar04147]
    124990878
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124990878
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     124990878
Cytoskeleton proteins [BR:ncar04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    124990878
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124990878
  Exosomal proteins of other body fluids (saliva and urine)
   124990878
  Exosomal proteins of colorectal cancer cells
   124990878
SSDB
Motif
Pfam: Tubulin_C Tubulin Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 124990878
NCBI-ProteinID: XP_047417332
LinkDB
Position
8:complement(122084926..122090802)
AA seq 415 aa
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLME
RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgccaagtgacaaaaccatcggtggcggggatgactcgttcaacacgttcttcagcgaa
accggggctggcaagcacgtgcccagagcagtgtttgtggacctggaacccactgtggtt
gatgaagtgcgcacggggacctacaggcagctctttcacccagagcagctgatcaccggg
aaggaagatgcagccaataattatgccagaggccattacaccattggcaaggagatcgtg
gacctggtcctggaccggatccgcaaactggcggatctgtgcacgggactgcagggcttc
ctcatcttccacagcttcgggggcggcaccggctctgggtttgcttccctgctcatggag
cggctgtcagtggactatggcaagaagtccaagctggaatttgccatctacccagccccg
caggtgtccacggccgtggtagagccctacaactccatcctgacgacccacacgaccctc
gaacactctgactgtgccttcatggtggacaacgaagccatctatgacatctgtcggcgc
aacctggacatcgagcgtcccacgtacaccaacctcaatcgtctgatcgggcagatcgtg
tcctccatcacggcctccctgcggttcgacggggccctgaacgtggacctgacggaattc
cagaccaacctggtgccatacccccgcatccacttccccctggccacctatgccccggtc
atctcggccgagaaagcctaccacgagcagctctcggtggctgagatcaccaatgcctgc
tttgagccggccaaccagatggtgaagtgtgaccctcgccacggcaagtacatggcctgc
tgcatgttgtacaggggggacgtggtccccaaagacgtcaatgcggccatcgccaccatc
aagaccaagcgcaccatccagtttgtggattggtgccccactggctttaaggtgggcatc
aactaccagccccccacagtggtgcccggaggagacttggccaaggtgcagcgggctgtg
tgcatgctgagcaacaccactgccatcgcagaggcctgggcccgcctggaccataagttc
gatctcatgtatgccaagcgggcctttgtgcactggtacgtaggagaaggcatggaggaa
ggggaattctcagaggcccgagaggacctggcagcactggagaaggattatgaagaggtg
ggtgtggattctgtggaagcagaagctgaagaaggggaagaatactga

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