Sciurus carolinensis (gray squirrel): 124990939
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Entry
124990939 CDS
T08117
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124990939
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Others
EARP complex
124990939
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
124990939
NCBI-ProteinID:
XP_047417459
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All DBs
Position
8:complement(49008757..49132606)
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AA seq
965 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDFGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEETASASEG
SNVMGTEETNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVSTSSKTETLFEQYCSGGNPFEIQASHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLAAAEERKEKVPSPHLSHLVVLTSG
DSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNTLWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHRQEYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctcatgacccgacagggtctgaaaagccctccagagagcctc
agtgattttggtgccattgagagtctccgggtccctggaaaggaggaattcagggaactt
cgagaacagccaagtgaccctcaagctgaacaagagctaattaatagtattgaacaagta
tatttttctgcggactcctttgatattgtcaaatatgagctggagaagctcccacctgtt
ctcaatttgcaagaattagaggagtatagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattgcagacaggccttcagttagccgcggttatctgcacaaatgggagg
agacacttgaatattgcaaaggaaggtttcactcaagctagtttgggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaaccataaaaacattg
caaagaacagatgtacgcttgagtgaaatgctggaggaggaagactatccaggagctatt
caattgtgcctggaatgtcagaaagctgccagtacttttaaacattatagttgtataagt
gagctgaattcaaagctgcaagatactttagaacaaattgaggaacaattggatgtagct
ctttccaaaatctgcaagaattttgacattaatcattataccaaggttcaacaggcttat
cgacttcttggaaaaacacagactgcaatggatcagcttcatatgcacttcacccaggcc
attcataatactgtgtttcaagtcgtccttggttatgtggaactatgtgcaggaaacacc
gatacaaaattccaaaagctgcaatataaagatctctgtacgcatgttacaccagacagc
tatattccatgccttgcagatctctgtaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcacgacagtgaggagactgcttctgcttctgaagga
agtaatgtaatgggtactgaagaaaccaattttgatcgtggctacgtgaaaaagaagtta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctatttgctt
ggaactgatttgtctatattcaaatatgatgacttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
attagaaaacaaagtgtcaactatttcaagaactaccatagaacacgactagatgaactg
agaatgttcttagagaatgagacttgggaactttgtcctgttaagtcaaatttcagcatt
ttgcaacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagt
aagcagccagtctcaacttcttcaaaaacagagaccttgtttgagcagtactgtagtggt
gggaatccatttgaaattcaggccagccacaaagatgaagaaacagaagatgtcttggct
tctaatgggtatgaatctgatgaacaagaaaagagtgcctatcaggagtatgacagtgac
agtgatgttcccgaggaactcaagcgagattatgtggatgagcagacaggagacgctcct
gtgaaaagtgtttctcgagaaaccctaaaaagtcggaagaaatcagattacagtctaaat
aaagtgaacgcacccatcttaacaaatacgacattgaatgtaataaggcttgttgggaaa
tatatgcagatgatgaacattcttaagccaattgcctttgatgttatccatttcatgtct
cagctatttgattattacttgtatgccatatataccttttttggccggaatgattcattg
gaatcaacaggactcggtcttagtagtagtagactaagaacaactctcaacagaatacaa
gaaagccttattgatttggaagtttcagctgatcctactgccacactcgcagcagcagaa
gaaagaaaggagaaggtacccagcccacacctcagtcacctagtggttttgacatctggg
gattcactgtatgggttggcagaaagagtggtagccacagaatccctggtatttctggct
gaacagtttgaattccttcagccacatctggatgctgtgatgccagcagtcaaaaagccc
tttctgcagcagttttattctcagacagtctcaactgctagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctcctaatggctaat
gtgaaatgggatgtaaaagaaatcatgtcacagcataacatatacgtagatgcattgtta
aaggaattcgagcagtttaacaggaggttaaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatacactttgggaacattgtatacgattggctaataggactattgtg
gaaggatatgccaacgtcaagaagtgcagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaa
gaatttgtggaaacttatatcaaagcctactacctaactgagaatgacatggaacgctgg
atcaaagagcacaggcaggaatattcaacaaagcaactgaccaatctggtgaatgtttgc
ctgggatcccatatcaataagaaagcaagacagaaacttctagcagctatagatgatata
gaccgacctaaaagataa
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