Sciurus carolinensis (gray squirrel): 124990968
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Entry
124990968 CDS
T08117
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124990968
Enzymes [BR:
ncar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124990968
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
90S particles
Helicases
124990968
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
HA2_C
DEAD
Helicase_C
AAA_22
AAA_19
WHD_HA2
nSTAND3
T2SSE
AAA_30
Herpes_ori_bp
AAA_5
ResIII
AAA_23
ATPase
Flavi_DEAD
AAA_16
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
124990968
NCBI-ProteinID:
XP_047417525
LinkDB
All DBs
Position
8:complement(138455031..138488118)
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AA seq
1164 aa
AA seq
DB search
MGKLRRRYNLKGRLQAGPDPGKGPPAPPAVRLELEDKDTLKGVDASNALVLPGRKKKKPK
APPLSKKEKKPLTRKERKVLQKILEQKEKKSQRAEMLQKLSDVQVSEAEMKLLYTTSRLG
TGDRMYHSREKPDAQAVQGQQKISSLGGAHRKRGHWLAEGESTSSEESEPDEAPAADGPG
AHTGSPSAPLPPAPAGIGHESPAPSRPPRAARASSPSQGTASHPPRPLAKPAVFVPVNRL
PEMQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDSIIGV
TEPRRVAAVAMSQRVAQEMNLSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL
SRYKVVVLDEAHERSVYTDVLLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRLF
PKPPPVIKVESRQFPVTVHFNKRTPLEDYAGECFRKVCKIHRMLPAGGILVFLTGQAEVH
ALCRRLRRAFPAPRARAPEKDQEDSVEEMRKFKRSRARAKRARTATLPQINLDNYSVLPV
GEGDEDREAEMDEEEVALGSDLDLDLGDGGPDGGEQPDASLPLHVLPLYSLLPPERQAQV
FRPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKRRFYDRVTGVSSFRVTWVSQASA
DQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPPPEITRRPVEDVVLQMKALNVEKVINFPF
PTPPSTEALVAAEELLIALGALQAPQQARRMKQLEVSRLSCPITVLGRTLATFPVAPRYA
KMLALSRQHGCLPYAIAIVAAMTVRELFEELDRPAASEEELASLKGRRARVAQVKRAWAG
QGASLKLGDLMVLLGAVGACEYAGCSPQFCEANGLRYKAMLEVRRLRGQLTTAVNAVCPE
AGLFLDPKMQPPTESQVTTLRQLVMAGLGDHVARRVQSEDLLDEKWRNAYRTPLLDDPVF
IHPSSVLFRELPEFVVYQEIVETTKMYMKGVSAVEVQWIPALLPSYCQFDPPLEEPAPVY
CRERGRVLCHRTSVFYRVGWPLPAVQVDYPEGLDCYKHFARFLLEGQVFGKLASFQGCLL
SSPSTMLKSWARLQPRTESLLRALVAEKADCRDALLAAWKKDPTPAGRVLRVAPPGRARP
HPGGLAPHLTLPGRWAAGPGPEEP
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagctgcgccggcggtacaacctcaaggggcgcctgcaggcgggccccgacccc
ggcaaggggccccctgccccgcccgcggtgcggctggagctggaggacaaggacacgctg
aaaggagtggacgcaagcaacgcccttgtgctgcccgggaggaagaagaagaagcccaag
gcccctcctctgtccaagaaagagaagaagcctctgaccaggaaggagaggaaggtgctg
cagaaaatcttggagcagaaggagaagaagagccagcgagcagagatgctccagaaattg
agtgacgtccaggtgtcggaggccgagatgaaactcttgtacaccacgtccaggctgggc
actggcgaccgcatgtaccacagcagagagaagcccgatgcccaggcagtgcagggccag
cagaagatcagcagcctggggggtgcccaccggaagcgcggccactggctggcagagggg
gagtccacgtcctccgaggagtcggagcctgacgaggcgcctgcggctgacgggcctggg
gcccacacagggtcccccagcgcacctctgccaccggccccagctggcattgggcacgag
agccccgcacccagcaggccgccccgtgcagcccgggcatcttctccctctcaggggaca
gcctcccacccgccgaggcccctggccaagcctgcagtgtttgtccccgtcaaccgcttg
cccgagatgcaggaagagcggctcaagctcccgatcctgtctgaagagcaggtgatcatg
gaggcggtggccgagcaccccatcgtcatcgtgtgtggcgagactggcagcgggaagacc
acgcaggtgccccagtttctctacgaagccggctacagcagcgacagcatcatcggagtc
acagagccccgccgagtggccgctgtggccatgtcccagcgagtggcccaggagatgaat
ctgtcacagagggtggtctcctaccagatccgctatgaagggaacgtgaccgaagagacc
aggatcaagttcatgacggatggggtgctgctcaaagaaatccagaaggacttcctgctg
tccaggtacaaggtggtggtcctggacgaggcccatgagcgcagtgtgtacacggacgtc
ctcctcggcctcctctcccgcatcgtggctctgcgggcaaagaggcacctgccgctgaag
ctgctcatcatgtcggccacactgcgagtggaggacttcacccagaaccagcggctcttc
cccaagccgccgcccgttatcaaggtcgagtcccggcagttccccgtgaccgtgcacttc
aacaagcgcactccgctggaagactacgctggcgagtgcttccggaaggtctgcaagatc
caccggatgctgcccgcaggcggtatcctggtgttcctgacgggccaggccgaggtgcac
gcgctgtgccgcagactcaggagggccttcccagcccccagggcccgggcaccagaaaaa
gaccaggaggactcagtggaggaaatgcgaaagttcaagaggtcccgggccagagccaag
agggctcggactgcgacgttgccccagatcaacctggataattactcggtgttgccagtg
ggcgaaggcgacgaggacagggaggccgagatggacgaggaggaggtggccctgggctcc
gaccttgatttggacctgggggacggagggccggacggaggtgagcagccggacgcctcc
ctgcccctccacgtgctcccgctctactccctgctgccccccgagaggcaagcgcaggtc
ttcagaccccccccagaggggacgaggctgtgtgtggtggccaccaacgtggccgagacg
tccctcaccatcccgggcatcaagtatgtggtggactgcgggaaggtcaagaggcgcttc
tacgaccgcgtcactggcgtgtcttccttccgggtcacctgggtctcccaggcgtcagct
gaccagcgtgcgggtcgtgcgggccgcacggagccaggccattgctacaggctgtactcg
tcggccgtcttcagtgactttgagcagttccctcctcctgagatcacccgcaggccggtg
gaggacgtggtcctgcagatgaaagctctcaacgtggagaaggtcatcaacttccccttc
ccaacgcctccctccacggaggctctcgtggctgcggaggagctgctgatcgcgttgggg
gccctgcaggccccgcagcaggcaagaaggatgaagcagctggaggtgtcccggctgagc
tgccccatcacagtgctgggcaggaccttggccaccttccctgtggctccccgctatgcc
aagatgctggcgctgagccggcagcacggctgtttgccctacgccatcgccatcgtggcc
gccatgaccgtgcgggagctgttcgaggagctggacaggccagcggccagcgaggaggag
ctcgcctccctgaagggcaggcgggcccgggtggcccaggtgaagcgggcctgggcgggg
cagggagcctccctgaagctcggggacctcatggtgcttctgggcgccgtgggagcctgc
gagtatgccggctgctcaccccagttctgcgaggccaatgggctgcggtacaaggccatg
ttggaggtccggcgcctgcggggccagctgaccactgcagtcaacgctgtgtgccccgag
gccggcctcttcctggatcccaagatgcagccgcccaccgagagccaggtgaccaccctg
cggcagctggtgatggccggcctgggcgaccacgtggcccgcagggtgcagagtgaggat
ctgctggatgagaagtggaggaacgcctacaggacgcctctcctggacgacccggtcttc
atccaccccagctccgtcctcttcagagagctccccgagttcgtggtctaccaggagatc
gtggagaccaccaagatgtacatgaaaggtgtctccgctgtggaggtccagtggatcccg
gctctgctgccctcctactgccagttcgacccgcccctggaggagccggcccccgtctac
tgccgcgagcggggccgggtgctctgtcaccggaccagcgtgttctatcgcgtcggctgg
cccctccctgccgtccaggtggattatccggaaggcctcgactgctacaagcactttgcg
aggtttctgctggaagggcaggtcttcggcaagctggcctctttccagggctgtctgctg
tccagcccgagcaccatgctgaagtcgtgggccaggctgcagccccggactgagagtctg
ctgcgagccctcgtggcagagaaggccgactgccgggacgccctgctggccgcctggaag
aaagaccccacacctgctggccgagtactgcgagtggctcccccaggccgtgcacgcccg
catccaggaggcctggccccccacctgacgctgcccggacgctgggctgcaggaccgggg
cctgaagagccctga
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