Sciurus carolinensis (gray squirrel): 124990988
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Entry
124990988 CDS
T08117
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3-like isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124990988
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124990988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124990988
03041 Spliceosome [BR:
ncar03041
]
124990988
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124990988
mRNA cycle factors
Common to processing body (P body) and stress granule
124990988
Spliceosome [BR:
ncar03041
]
Common components
Common spliceosomal components
hnRNP proteins
124990988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
124990988
NCBI-ProteinID:
XP_047417555
LinkDB
All DBs
Position
8:84525439..84526924
Genome browser
AA seq
379 aa
AA seq
DB search
MEVKPPPGRPQPESRRRCRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGT
LTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPS
AHLTMKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV
DKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRSHGGGSGNFMGRGGNFGGGGGNFGRG
GNFGGRRGYGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGVPGYSSRGGYGGGGPGYGNQG
GGYGGGGGGYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSP
YGGGYGSGGGSGGYDSRRF
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaaccgccacccggtcgcccccagcccgaatccagacgtcgctgccgccgc
cggggggaggagggccatgatccaaaggaaccagagcaattgaggaagctgtttattggt
ggtctgagctttgaaacgacagatgatagtttaagagaacattttgagaaatggggcaca
ctcacagattgtgtggtaatgagagacccccaaacaaaacgttccaggggctttggtttt
gtgacttactcttgtgttgaagaggtggatgcagcaatgtgtgctcggccacacaaggtt
gatgggcgtgtagtggaaccaaagagagctgtttctagagaggattctgtaaagcctagt
gcccatctaacgatgaaaaaaatttttgttggtggtattaaagaagatacagaagaatat
aatttgagagattactttgaaaagtatggcaagattgaaaccatagaagttatggaagac
aggcagagtgggaaaaagagaggatttgcttttgtaacttttgatgatcatgatacagtt
gacaaaattgttgttcagaaataccacactattaatgggcataattgtgaagtgaaaaag
gccctttctaaacaagagatgcagtctgctggatcacaaagaagtcatggtggtggatct
ggcaactttatgggtcgtggaggaaactttggaggtggtggaggtaactttggccgtggt
ggaaactttggtggaagacgaggctatggtggtggaggtggtggcagcagaggtagttat
ggaggaggtgatggtggatataatggatttggaggtgatggtggcaactacggcggtgtt
cctggttatagtagtagaggaggctatggtggtggtggaccaggatatggaaaccaaggt
ggtggatatggtggtggaggaggaggatatgatggttacaatgaaggaggaaattttggt
ggtggtaactatggtggtggtgggaactataatgattttggaaattacagtggacaacag
caatcaaattatggacccatgaaggggggaagttttggtggaagaagctctggcagtccc
tatggtggtggttatggatctggtggtggaagtggtggatatgatagcagaaggttttaa
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