Sciurus carolinensis (gray squirrel): 124990993
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Entry
124990993 CDS
T08117
Name
(RefSeq) F-box/WD repeat-containing protein 8
KO
K10264
F-box and WD-40 domain protein 8
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124990993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124990993
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124990993
Cul7 complex
Target recognizing subunit
124990993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
F-box-like
WDR55
F-box
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40
Beta-prop_SCAP
Beta-prop_EML
EIF3I
WDR90_beta-prop_4th
BBS2_Mid
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
124990993
NCBI-ProteinID:
XP_047417561
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All DBs
Position
8:complement(135306796..135412411)
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AA seq
598 aa
AA seq
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MDDHSLEEFRRCWQEELAQAQAQRKRRRPEAAERRPRRADVAPGRGEQASGYLALAQGLL
EGAGRPPAVRATRAERQDAASRSRSPPVREGAGGGEQLVDQLIRDLNEMDDVPFFDIQLP
YELAINIFQYLNRKELGRCAQVSKTWKVIAEDEVLWYRLCQQEGHLPESSISDYSCWKLI
FQECRAKEHMLRTNWKNRRGAVSELEHVPDAVLCDVHSHDGVVIAGYTSGDVRVWDTRTW
DYVAPFLESEYEEDEPGMQPYVSFVRINSSLAVAAYEDGFLNIWDLRTGKYPIHRFEHDA
RIQALALSQEDATVATASAFDVVMLYPNEEGYWQIAAEFEVQKLVDYLEIVPDTGRYPVA
VATAGDLVYLLKAEDSARTLHYVYGQPVTCLDVSASQVAFGVKSLGWVYEGNKILVYSLE
AERCLSKLGNALGDFTCVNLRNSPPSLMVSGNMDRRVRIHDLRTDKIALSLSAHQLGVSA
VQMDDWKIVSGGEEGLVSVWDYRMNQKLWEVHSRHPVRHIAFTSHSLITANVPYERVVRH
SDLDSFATHRRHRGLIHAYEFAVDQLAFQSPLPVCRSSCDTMTSYNYDLALTFPYDSI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccacagcctggaggagttccgtcggtgctggcaggaggagctggcgcaggcc
caggcgcagaggaagcggcggcgacccgaggctgccgagcggcggccgcggcgggccgac
gtggctccggggcgcggcgagcaggcctcggggtacctggcgctggcccagggcctcctg
gagggcgcggggcggcccccggcggtgcgggcgacccgggccgagaggcaggacgcggcg
agccgttcccgctcccctcccgtccgcgaaggcgcggggggcggggagcagctggtggat
cagctcatccgcgacctgaatgaaatggacgatgtgcccttctttgatatccaactgcct
tatgaattggcaatcaatatatttcagtatctgaacaggaaagaactaggaaggtgtgca
caggtgagcaagacgtggaaggtgattgctgaagatgaggtgctgtggtaccggctgtgc
cagcaggaagggcaccttccggagagcagcatctcagattattcctgctggaagctcatc
ttccaagagtgccgagccaaggaacacatgttaaggaccaactggaagaatcgcagaggt
gccgtgagtgagctggagcacgttcctgatgcggttttatgcgatgtgcactctcacgat
ggcgttgtcattgctggatatacatcaggggatgtgagggtgtgggacacccgcacctgg
gactatgtggcccccttcctggaatcagagtatgaggaggacgagcctggaatgcagcca
tatgtctcctttgtgaggatcaacagctcgctggcggtggcagcttatgaggatggattt
ctcaatatttgggacttgaggactgggaagtatcctattcatcgttttgagcatgatgca
agaatacaggcgctagccctcagccaggaagatgccacggttgccacagcttcagctttt
gatgttgtgatgttgtatcccaacgaggaggggtactggcaaatagctgcagaatttgag
gttcagaaactggttgactacctggaaatagttccggatactggaaggtaccctgtggca
gtggccactgctggagatctggtatacctgctgaaagctgaggactcagccagaaccctc
cactacgtctacggccagcctgtcacatgtttagacgtctcagccagccaggttgctttc
ggagtaaagagtctcggatgggtgtatgaaggaaacaagatcctggtgtacagcctggaa
gctgaacgctgcctctcgaagctgggtaatgcacttggtgacttcacttgtgtcaacctc
aggaacagccctcccagcctcatggtcagtggcaacatggacaggagggtgaggatccat
gacctgcgcactgataaaatcgccctatcactctccgcccaccaacttggggtctctgcc
gtccagatggatgactggaaaattgtcagtggaggcgaggaaggcctggtgtctgtgtgg
gactaccggatgaaccagaagctgtgggaggtccattccaggcaccctgtgaggcacatc
gcgttcaccagtcacagcctcatcacggccaacgtgccctacgagagggtggtgcggcac
tcagacctggacagcttcgccactcacaggagacaccgggggctgattcatgcctatgag
tttgcagtggaccagctggccttccagagccctctgcccgtctgccgctcctcctgtgac
accatgaccagttacaactacgaccttgcgctgacttttccctatgacagtatttag
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