Sciurus carolinensis (gray squirrel): 124991096
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Entry
124991096 CDS
T08117
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03018
RNA degradation
ncar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124991096
09123 Folding, sorting and degradation
03018 RNA degradation
124991096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124991096
03041 Spliceosome [BR:
ncar03041
]
124991096
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124991096
mRNA degradation factors
5'-3' decay
Lsm complex
124991096
Spliceosome [BR:
ncar03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124991096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
124991096
NCBI-ProteinID:
XP_047417794
LinkDB
All DBs
Position
8:complement(34917787..34923139)
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AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgccttagagaactacatcaaccgaactgttgctgttattacttctgatggg
agaatgattgtgggaacactgaaaggttttgaccagactattaatttgattttggatgaa
agccatgaacgagtattcagctcttcacagggagtagagcaagtggtattggggctctac
attgtgagaggtgacaatgttgcagtcattggagaaattgatgaagagacagattctgcg
cttgacttggggaatattcgagcagaacctctaaactctgtagcacactga
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