Sciurus carolinensis (gray squirrel): 124991124
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Entry
124991124 CDS
T08117
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03082
ATP-dependent chromatin remodeling
ncar04714
Thermogenesis
ncar05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124991124
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
124991124
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
124991124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124991124
03036 Chromosome and associated proteins [BR:
ncar03036
]
124991124
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124991124
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124991124
PBAF complex
124991124
GBAF(ncBAF) complex
124991124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
SWIB
NBCH_WD40
ANAPC4_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
124991124
NCBI-ProteinID:
XP_047417839
EnsemblRapid:
ENSSCRG00010014671
ENSSCRG00010014709
LinkDB
All DBs
Position
8:5855329..5984074
Genome browser
AA seq
876 aa
AA seq
DB search
MGGGGSSLRVCADHRGGINWLSLSPDGQRLLTGSEDGTARLWSTADGRCCALLQGHESYV
TFCQLEEEAAFTCSADCTIRRWDVLTGRCLQVYRGHTSIVNRILVANNQLFSGSYDRTAR
IWTVDGGQVSQELRGHRNCVLTLAYSTPWDVPGTPCLEETMAGGLLVTGSTDGTAKVWQV
ASGCCHQTLRGHTGAVLCLVLDAPGRTAFTGSTDATIRAWDILTGEQLRVFREHQGSVIC
LELVDRLLYSGSADRTARCWLADVGEQVRTFPAHRHSVSALKYHAGTLFTGSGDTCARAF
DAQSGALQRVFRGHSFVINCLQTLPAPPPLRAAAAQAPGRAERRAGSGRPRSGPGSPGSR
SSSEWPLVLQARRALGPGTEGALDDSPSCRTLPSMTPGLQHPPTVVQRPGMPSGARMPHQ
GAPMGPPGSPYMGSPAVRPGLAPAGMEPARKRAAPPPGQSQAQSQGQPVPTAPARSRSAK
RRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRL
YISNTFNPAKPDAEDSDGSIASWELRVEGKLLDDVRPGPGLSRCPGPSKQKRKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDP
RLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQ
RLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISA
LDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNPEEERRA
EFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVVRNT
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggcgggtcgtccctgagggtctgcgcggatcaccgcgggggcatcaactgg
ctgagcctgagcccggatgggcagcgcctgctgaccggcagcgaggacggcacggccagg
ctctggagcacagcggacggccggtgctgcgcgctcctgcaaggacacgagagctacgtc
accttctgtcagctggaggaggaggctgccttcacctgcagcgctgactgcaccatcaga
aggtgggacgtgctgaccgggcggtgcctgcaggtgtaccgaggacacacgtccatcgtg
aacaggatcctggttgccaataaccaactcttcagtggctcctacgaccggacggctcgc
atctggactgtggatggggggcaggtgtcccaggagctccggggtcaccgcaactgcgtg
ctgacgctggcctactccaccccgtgggacgtccctggcactccctgcttggaggagacc
atggctggggggctcctggtgaccggcagcacagacggcacagccaaggtgtggcaggta
gccagcggctgctgccaccagacactgcggggccacacgggtgccgtgctgtgcctggtg
ctggacgcgcctggacgcacggccttcactggcagcactgacgccaccatccgcgcctgg
gacatcctgacgggggagcagctgcgcgtgttccgggaacaccagggctccgtcatctgt
ctggagctcgtggaccgactcctgtattcaggcagcgcggacaggacagccaggtgctgg
ctggcggatgtgggggagcaggtgcgcaccttcccagcccacagacacagcgtgagcgcc
ctcaagtaccacgcgggcaccctattcacaggcagtggcgatacctgtgcccgggccttt
gacgcccagtctggagcgctgcagagggtgttccggggccacagcttcgtcatcaactgc
ctgcagacgctccctgcgcctcccccgctccgggctgcagcggcgcaggcgccgggccga
gccgagcgccgagcggggagcgggcgaccgcgctccgggccggggtccccggggagcaga
tcctcctcagaatggcccttggtgctgcaggcgaggcgggctctgggcccgggcaccgag
ggggcactggatgactcacccagttgcaggaccctgccatctatgactccaggccttcag
cacccacccaccgtggtacagcgccccgggatgccgtctggagcccggatgccccaccag
ggggcgcccatgggccccccgggctccccgtacatgggcagccccgccgtgcgacccggc
ctggcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagc
caggcacagagccagggccagccggtgcccaccgcccccgcgcggagccgcagtgccaag
aggaggaagatggctgacaaaatcctccctcaaaggattcgggagctggttcctgagtcc
caggcttacatggacctcctagcttttgagaggaaactggatcaaaccatcatgcggaag
cgggtggacatccaggaagcactgaagaggcccatgaagcaaaagcggaagctacgtctt
tatatctccaatacttttaaccctgcgaagcctgatgcggaagattctgatggcagcatt
gcctcctgggagctgcgggtggaggggaagctcctggatgatgtacgtcctggcccaggt
ctctccaggtgtcctgggcccagcaagcagaagcggaagttctcttccttcttcaagagt
ttggtcattgagctggacaaagacctctatggccctgataaccaccttgttgagtggcac
cggacacccacaacccaggagacagatgggttccaggtgaagaggccgggggacctaagt
gtgcgctgcaccctgctcctcatgctggactaccagcctccccagttcaaactggacccc
cgcctggcccggctgctaggattgcacacacagagtcgctcagccattgtccaggccctg
tggcagtacgtgaagaccaataggctgcaggactcccacgacaaagaatacatcaatggg
gacaagtatttccaacagatttttgattgtccccggctgaagttctctgagattccccag
cgcctcacagccctgctgttaccccctgatcccattgtcatcaaccacgtaatcagtgtg
gacccgtcagaccagaagaaaacggcatgctatgacattgacgtggaagtggaggagcca
ctgaagggacagatgagcagcttcctcctgtccacagccaaccagcaggagatcagtgct
ctggacagtaagatccatgagacgattgagtccataaaccagctcaagatccagagggac
ttcatgctaagcttctccagagaccccaaaggctatgtccaagacttgctccgctcccag
agccgggacctcaaggtgatgacagatgtggctggcaaccccgaagaggagcgtcgtgcc
gagttctaccaccagccctggtcccaggaagccgtcagccgatacttctactgcaagatc
cagcagcgcaggcaggagctggagcagtcgctggttgtgcgaaacacctag
DBGET
integrated database retrieval system
