Sciurus carolinensis (gray squirrel): 124991144
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Entry
124991144 CDS
T08117
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124991144
Spliceosome [BR:
ncar03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
124991144
Other components
Complex C specific factors
124991144
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
124991144
NCBI-ProteinID:
XP_047417893
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All DBs
Position
8:complement(126575432..126594325)
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AA seq
837 aa
AA seq
DB search
MSLSHLYRDGEGRVEDDDDERENFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAERDSD
EERPSFGGKRARDYSAPVNFISAGLKKGAAEEAELEDSDDEEKPMKQEDFPKDFGPKKLK
TGGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIE
AKQRKGKGAVGAYGSERTTQSLHDFPAVDSEEEAEEEFQKELSQWRKDPSGSKKKPKYSY
KTVEELKAKGRVSKKLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNVPDDGLPPQS
QLPPLPGKEAKAPGFALPELEHNLQLLIELTEQEIIQNDRQLQYERDMVVNLSHELEKTA
EALAHEERVISNLGRVLEMVEECERRMQPGCTSPLTLEECARVFQTLQDKYYEEYRMSDR
VDLAVAVVYPLMKDYFKEWDPLKDCTYGTEIISKWKSLLENDQLLSHSGQDLSSDAFHRL
IWEVWMPFVRNIINQWQPRNCEPMVDFLDSWAHIIPVWILDNILDQLVFPKLQKEVDNWN
PLTDTVPIHSWIHPWLPLMQARLEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFT
PGSWEAFMVKNIVPKLGMCLGELVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFP
KWLQVLCSWLSNGPNYEEITKWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVG
AYMQPGARENIAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASSVPMNFKDLIETK
AEEHNIVFMPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtcccacttgtaccgggacggggaaggccgcgtggaggatgatgacgacgag
cgggagaactttgagatcaccgactgggatctccagaatgagttcaaccccaaccggcag
cgccactggcagaccaaggaagaggccacctacggggtgtgggccgagcgcgactccgat
gaggagaggcccagttttggaggcaaacgggcccgagactactctgcgcccgtcaacttc
atcagtgcagggctcaagaaaggggcagctgaggaggcagagctggaagattctgatgat
gaagagaaacccatgaagcaggaagacttccctaaggattttggaccaaagaagttaaaa
acgggtggcaattttaagcccagccagaaaggttttgcaggaggaactaaatctttcatg
gactttggcagctgggaaagacacacgaaaggaattgggcagaagctccttcagaagatg
ggctacgtgcccgggcggggcctcgggaagaacgcgcagggaatcatcaacccgatcgaa
gccaagcagaggaaggggaaaggggccgtgggagcctacggctcggagcggaccacccag
tccctgcacgacttccccgccgtggactcggaagaggaagctgaggaggagtttcagaag
gagctgagccagtggaggaaggaccccagtggaagcaagaagaagcccaagtactcctac
aagacggtggaagagctgaaggccaagggcagggtcagcaagaagctggcggctcctcag
aaggagctctcccaggtcaaggtcatagacatgacgggccgggagcagaaggtctactac
agctacagccagatcagccacaagcacaatgtccccgacgacgggctcccgccgcagtcc
cagctgccgccactgcccggcaaggaggccaaggcccccggcttcgccctgcccgagctg
gagcacaacctgcagctgctcatcgagctcacggagcaggagatcatccagaacgaccgg
cagctgcagtacgagcgggacatggtggtgaacctgtcgcacgagctggagaagacggcc
gaggccctggcgcacgaggagcgcgtcatctccaacctgggcagggtgctggagatggtg
gaggagtgcgagcggcgcatgcagcccggctgcaccagccccctcaccctggaagagtgc
gcccgcgtcttccagaccctgcaggacaagtactacgaggagtaccgcatgtcggaccgc
gtggacctggccgtggccgtcgtctacccgctcatgaaggactacttcaaggagtgggat
cccctcaaagactgcacctacggcacggagatcatctccaagtggaagagcctcctggag
aacgaccagctgctgtcccacagcggtcaggacctctcctcagacgccttccacaggctc
atctgggaagtctggatgccttttgttcggaacatcatcaaccagtggcagccgaggaac
tgcgagcccatggtggacttcctggacagctgggcgcacatcatccccgtgtggatcctg
gacaacatcctggaccagctcgtcttccccaagctgcagaaggaggtggacaactggaac
cccctgacggacaccgtccccatccactcctggatccacccgtggctgccgctcatgcag
gcgcgcctggagccgctgtactcccccatccgcagcaagctgtccagcgccctgcagaag
tggcaccccagcgactcctcggccaagctcatcctccagccctggaaggacgtcttcacc
cccggctcctgggaggcgttcatggtcaagaacatcgtgcccaagctgggcatgtgtctg
ggcgagctggtcatcaacccccaccagcagcacatggacgccttctactgggtcatcgac
tgggagggcatgatctccgtctccagcctggtggggctcctcgagaagcacttcttcccc
aagtggctccaggtgctgtgctcctggctcagtaatggtcccaattacgaggagatcacc
aagtggtacctgggctggaagtccatgttctcagaccaggtgctggcccacccgtccgtc
aaggacaagtttaatgaagcactggacatcatgaacagggcggtgtcctcgaacgtcggt
gcctacatgcagccgggagcgcgggagaacatcgcctacctcacccacacggagcggagg
aaggacttccagtacgaggccatgcaggagcgccgggaggccgagaacatggcccagagg
ggcatcggcgtggccgccagctctgtgcccatgaacttcaaggacctcatcgagaccaag
gccgaggagcacaacatcgtgttcatgccggtcatcggcaagcggcacgaggggaagcag
ctctacaccttcggccgcatcgtcatctacatcgaccgaggggtggtgttcgtccagggt
gagaagacctgggtgcccacctccctgcagagcctgatcgacatggccaagtag
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