Sciurus carolinensis (gray squirrel): 124991283
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Entry
124991283 CDS
T08117
Name
(RefSeq) hyaluronidase-1-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00531
Glycosaminoglycan degradation
ncar01100
Metabolic pathways
ncar04142
Lysosome biogenesis
Module
ncar_M00076
Dermatan sulfate degradation
ncar_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
124991283
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
124991283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
ncar02042
]
124991283
00536 Glycosaminoglycan binding proteins [BR:
ncar00536
]
124991283
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ncar00537
]
124991283
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
124991283
Bacterial toxins [BR:
ncar02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
124991283
Glycosaminoglycan binding proteins [BR:
ncar00536
]
Heparan sulfate / Heparin
Enzymes
124991283
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ncar00537
]
Enzymes
124991283
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
124991283
NCBI-ProteinID:
XP_047418062
LinkDB
All DBs
Position
8:complement(29513043..29523209)
Genome browser
AA seq
488 aa
AA seq
DB search
MRNAWVASSGVMLLCVTVTLSALKPALPPVIKDQPFNIFWAASTIYCKEFFKVNMNLQLF
NIISNPLETHSGSTIAIFYPNELGYYPYFSQDGKSFNGGIPQNMSLPKHVKKTAEDIAET
VSWWQSEGLVIIDWEGWKPQWERNWGSRIIYKNHSIAFTRQHHPEWPEAKVNTVAQQEFE
KAGRSFMNVTLTLASEMRPKHLWGFYLYPDCYNYDYRINPEFYTGNCPADEIVRNDQLLW
LWNKSTALFPSIYLDKILKSSSNALKFVHYRIREAMRIAERARQDYALPVFIFSRPFYLK
SIEVLSEEDLVHTIGESAALGAAGIILWGGNEYSTSKDTCLSVQQSIQGPLGHYAVNVTT
AAKLCSQSLCNSHGRCVRKTPESSSYLHMPESSRKKYVPQKSFRFDISERSKLQTVMNMK
NGFVCHCYYSWGGESCHLPSSDLLSWKNKAPVANFNFPVFLGITLSVILMKFFIPYYIVI
LFSCNTRE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaacgcgtgggtggccagctcaggggtgatgctgctttgtgtcacggtcactcta
tcagccctcaaaccagcactacctcccgtgatcaaagaccagcctttcaacatcttctgg
gcagcctccaccatttattgtaaggaattcttcaaggtgaatatgaatcttcaattgttt
aacattatatcaaatcctttagagactcacagtggatcaacgattgccatattctatcca
aatgaattgggatattacccttatttctcccaagatggaaaatcctttaatggaggaata
ccacagaatatgagccttcctaaacacgttaagaaaacggccgaagatattgctgaaact
gtctcttggtggcaatccgaaggacttgttatcattgactgggaaggttggaagccccag
tgggagaggaactggggcagcagaataatatataaaaaccactccatagccttcacgaga
caacaccaccctgagtggccagaagccaaagtgaacacagttgcccaacaggaattcgaa
aaggctggaaggagttttatgaatgtcactctcacactggcttcagaaatgagaccaaaa
catttatggggcttttatctctatccagattgctacaattatgactacaggataaaccca
gagttctacacaggtaattgcccagctgatgagattgtccgcaacgaccagctcctttgg
ctgtggaacaaaagcacagcactctttccttccatatatttggataaaatactcaagtca
agttcaaatgcattgaagttcgttcattatcgaattagagaagccatgagaattgctgaa
agggctagacaagattatgctttgccagtttttattttttccagaccattttatttgaaa
agtattgaagttctgtcagaggaggacttagtgcacaccattggtgaaagtgctgcattg
ggtgcagcaggaataatattgtggggaggaaatgaatattcaacttcaaaggacacctgc
ttatctgtgcaacagtctattcaagggccactgggtcactatgctgttaatgtgacaact
gcagccaagctctgcagtcaaagtctatgcaacagtcatggaaggtgtgttcgaaaaaca
cctgaatcttcctcttacctgcatatgcctgaaagcagcagaaagaaatacgtcccccag
aagagcttcagatttgacatttctgagaggagtaaactgcagacagtaatgaacatgaag
aatggatttgtgtgtcactgctattatagctggggtggagagtcttgccaccttccctcc
tcagatctcttgagttggaagaacaaggctcctgtcgctaactttaatttcccagttttt
cttggcataaccttatctgtgattctgatgaaattctttattccttactacattgtcata
cttttttcttgtaatactagagagtag
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