Sciurus carolinensis (gray squirrel): 124991545
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Entry
124991545 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 30-like
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124991545
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124991545
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124991545
04121 Ubiquitin system [BR:
ncar04121
]
124991545
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124991545
Peptidases and inhibitors [BR:
ncar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124991545
Membrane trafficking [BR:
ncar04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
124991545
Ubiquitin system [BR:
ncar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124991545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
124991545
NCBI-ProteinID:
XP_047418163
LinkDB
All DBs
Position
8:131106410..131136522
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AA seq
595 aa
AA seq
DB search
MWSSRAEAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK
KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIKWLEEFTTQYTRDQKEPPRHQYLSLTL
LHLLKALSCQEVTEEEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ
PRVTHLFDVHSLEQQPEITPKQITCRTRGSPHPASSHWKAQHPFHGRLTSNMVCKHCEHQ
SCSIDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNGEKV
EHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYHLLGH
KPSRPSPKLKEGPGPALEPQDGPAAPRPVLNQPGPPKTQIFMNGACSPSLLPTLPPPLSF
PLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVXYRRSPPSAKNPLSTSSQWLWISDDTV
RKASLQEVLSASAYLLFYERVLCRTQPQGQEYKSEEVTVHDVQDRSQVVPCVCASSPWSP
PPSGVLSAGCTQGLTRPAWWPWEAEESGHVSSCSSGAVIKSSQIPEATFSCIVTC
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtggagctcccgggccgaggctgcgatgacggcggccgaccgggctatccagcgtttc
ctgcggaccggggcggccgtcagatataaagtcatgaagaactggggagttataggtgga
attgctgctgctcttgcagcaggaatatacgttatttggggtcccattacagaaagaaag
aaacgtagaaaagggctcgtgcctggcctggtcaatttagggaacacctgcttcatgaac
tccctgctccagggcttgtctgcctgtcctgctttcatcaagtggctggaggaattcacc
acgcagtacaccagggaccagaaggagcccccccgacaccagtacctgtcgttgacactg
ctgcacctcctgaaagctttgtcctgccaagaagttactgaggaagaggtcttagatgca
agctgcttgctggatgtcttaagaatgtacagatggcagatctcttcctttgaggaacag
gatgcccacgagttattccacgtcatcacctcatccctggaggacgagcgggaccgccag
ccgagggtcacgcatttgttcgatgtgcattctctggagcagcagccagaaatcactccc
aagcaaataacctgccgcacaagagggtctcctcaccccgcgtccagtcactggaaggca
cagcacccttttcatgggagactcactagcaacatggtctgcaaacactgtgaacaccag
tcctgttcgattgatacctttgatagcctttcactaagtattccagctgccacttggggt
caccccctgaccctggaccactgccttcaccacttcatctcatcggaatccgtgcgtgat
gttgtgtgtgacaactgtacaaagattgaagcaaaaggaacattgaacggggagaaggtg
gagcaccagaggaccacttttgttaaacagttaaaactagggaagcttccccagtgtctc
tgcatccacctgcagcggctgagctggtccagccatggcacaccgctgaagcggcatgag
cacgtgcagtttaacgagttcctgatgatggacatctacaagtaccatctcctgggacat
aaacccagtcggcccagccctaagctgaaggagggccctggccccgcgctggaaccgcag
gacgggcccgcagcccccaggccagttctgaatcagccagggccccccaaaacccagatt
tttatgaatggcgcctgctccccatctttgttgcctaccctgccacccccgttgtccttc
cctctcccggttgttcctgactacagctcctccacatacctcttccggctgatggccgtg
gtcgtccaccatggagacatgcactctggacactttgtcnactaccgacggtctccacct
tcagccaagaaccctctctccaccagcagtcagtggctgtggatctccgacgacacggtg
cgcaaggccagcctgcaggaggtgctgtccgccagcgcgtacctgctcttctacgagcgc
gtgctctgcaggacgcagccccagggccaggagtacaagtctgaggaagtgaccgtccac
gacgtccaggacagaagccaggtggtgccgtgtgtgtgcgcaagcagcccctggagccct
ccgccctccggtgtgttgagcgcaggctgcacgcaggggctgacccgcccggcctggtgg
ccctgggaggcggaggagagcggccatgtgtcttcttgctcatctggtgcagttattaaa
agcagccagattccggaagccacattttcttgtatcgtaacatgttag
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integrated database retrieval system
