Sciurus carolinensis (gray squirrel): 124991605
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Entry
124991605 CDS
T08117
Name
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 9 isoform X1
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00512
Mucin type O-glycan biosynthesis
ncar00514
Other types of O-glycan biosynthesis
ncar01100
Metabolic pathways
Module
ncar_M00056
O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
124991605
00514 Other types of O-glycan biosynthesis
124991605
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124991605
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
124991605
Glycosyltransferases [BR:
ncar01003
]
O-Glycan biosynthesis
Mucin-type
124991605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_transf_7C
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
124991605
NCBI-ProteinID:
XP_047418245
EnsemblRapid:
ENSSCRG00010010740
LinkDB
All DBs
Position
8:complement(142809133..142880149)
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AA seq
701 aa
AA seq
DB search
MAVARKIKTLLTVNILVFVGIVLFSVYCRLQDRSAALVQVVSGADRRVRSRHAKVGALAD
REAILQRLDHLEEVVYNQLNGLAKPIGLVEGPGGLGQGGVAATLQGDSQEREGKYEEYGY
NAQLSDRISLDRTIPDYRPKKCRQLTYSGDLPQVSVVFIFVNEALSVILRSVHSVVNHTP
SRLLKEVILVDDNSDNAELKLSLDQYVQRRYPGLVKVVRNSRREGLIRARLQGWRAATAP
VVGFFDAHVEFNTGWAEPALLRIREDRRRIVLPAIDNIKYSTFEVQQYASAAHGYNWGLW
CMYIIPPQDWLDRGDEAAPIRTPAMIGCSFVVDREYFGDIGLLDPGMEVYGAENIELGMR
VWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRNALRAAEVWMDDFKSHVYMAWNIP
MTNPGVDFGDVSERLALRRRLKCRSFKWYLENVYPEMRTYNNTLTYGEVRNSKASGYCLD
QGAEDDDRAILYPCHGMSSQVGCTQVAGGRCSRLWGPRAPRPPGPQTGTQSQAWAALCPC
PRQHRDGDGASSAWGHSPPARPQPGPGDPHPIESPGVRVTGSPLRVTTRLGLWCRSRVSL
APSCDPQPPHAHRPPGRGQWPQRWACAGHQGAVGEAAPLGAPRLPSGALTDVQQPSACGF
KGKTDLQGGQRRLPNRSSSPPQNTWRPSGQQAPAQDCRRWP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccaggaagatcaaaactttgctgacggtcaacatcctggtgttcgtgggc
atcgtcctcttctccgtgtactgccgcctgcaggaccgctcggccgcgctggtgcaggtc
gtgagcggcgccgaccgccgggtgcgcagccggcacgccaaggtgggcgcgctggccgac
cgcgaggccatcctgcagcgcctggaccacctggaggaggtggtctacaatcagctcaat
ggtctcgccaagcccatcggcctggtggaggggccgggcggcctgggccagggaggtgtg
gcggccaccctgcagggcgacagccaggagagggaaggcaagtacgaggagtacggctac
aacgcgcagctcagcgaccgcatctccctggacaggaccatccctgactacaggcccaag
aagtgccggcagctgacctactcgggagacctgccccaggtgtccgtggtcttcatcttc
gtcaacgaggcgctgtctgtcatcctgcgctccgtgcacagcgtggtcaaccacacgccc
tcccggctgctgaaggaggtcatcctggtggacgacaacagcgacaacgccgagctcaag
ctcagcctggaccagtacgtgcagcggcggtacccaggcctggtgaaggtcgtgcgcaac
agccggcgggagggcctgatccgggcgcggctgcagggctggagggcggccaccgccccc
gtggtcggcttcttcgacgcccacgtggagttcaacaccggctgggccgagcctgccctc
ctgcggatccgcgaggaccggagacgcatcgtcctgcctgccatcgacaacatcaagtac
agcaccttcgaggtgcagcagtacgccagcgccgcccacggctacaactgggggctctgg
tgcatgtacatcatcccaccccaggactggctggaccgcggagacgaggcggcccccatc
aggacccccgccatgatcggctgctccttcgtggtggaccgcgagtacttcggggacatc
ggcctgctggacccgggcatggaggtgtacggtgcggagaacatcgagctggggatgagg
gtgtggcagtgtggcggcagcatggaggtgctcccctgctcgcgcgtggcgcacatcgag
cgcacccgcaagccctacaacaacgacatcgactactacgccaagcgcaacgcgctgcgg
gcagcggaggtctggatggacgacttcaagtcccacgtctacatggcctggaacatcccc
atgaccaacccaggggtggacttcggggacgtgtctgagaggctggccctgcgccggagg
ctgaaatgccgcagcttcaagtggtacctggagaacgtgtaccccgagatgaggacctac
aacaacaccctcacgtacggagaggtgagaaacagcaaggccagcggctactgcctggac
cagggggcggaagacgatgaccgggccatcctctacccctgccacggcatgtcctcccag
gtaggctgcacgcaggtggcaggcgggcgctgctcccggctgtgggggcccagagcgccg
cgtcccccagggccgcagacgggcacccagagccaggcctgggcagccctgtgcccctgt
ccccgtcaacaccgggacggcgatggtgcttcctcagcctggggccactcaccaccggcg
agaccccagccagggcctggtgacccccacccaatagagagcccaggggtccgggtcaca
gggtcccctctgcgtgtgaccacgcgcctgggtctctggtgccggagtcgggtgtcgctg
gccccctcgtgtgaccctcagcccccccatgctcacagaccccccgggcgaggccagtgg
ccccagcgttgggcttgcgctggccaccagggcgcggtgggcgaggcggctcccctgggg
gctccccgcttgccctctggagccttgaccgacgtccagcagccttcagcctgtggcttc
aagggcaaaacagacctccagggaggccagaggaggctgccgaacaggtccagttccccg
cctcagaacacgtggcgaccctctggccagcaggcgccagcccaggactgcaggaggtgg
ccctag
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