Sciurus carolinensis (gray squirrel): 124991654
Help
Entry
124991654 CDS
T08117
Name
(RefSeq) rho guanine nucleotide exchange factor 5-like
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124991654
Membrane trafficking [BR:
ncar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124991654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARHGEF5_35
RhoGEF
SH3_1
SH3_2
SH3_9
PH
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
124991654
NCBI-ProteinID:
XP_047418344
LinkDB
All DBs
Position
8:complement(11666509..11691293)
Genome browser
AA seq
1561 aa
AA seq
DB search
MEAEEPQPGASTPIPAIEEFRIIPEAIMRSSQIPAMDLEAQEDQDPPYKWAEGQRLLLTQ
PRELQGMTEHADEGRPSFPEERSADTETNQESLVAEAWETPEHQEAMPQSLADRGSIAPA
PLELWSCPIEGEQLDMFSVSSEMDSRTEVGFQPDLASLTLGIGQAKEKAETSPDTFWLPC
EEHPAETSQTEDSRGGTVSQEEQEGQGREGLLQPQETQGFEEQEQYEMGFQGKGVLGEDA
CSHGLCGEQEQLVEQVHGRERGHRQKQEQMQDDGMLGGQERGGLDGGLEVLNCGEQGQQG
RERQAQGQGGLDEEEQRKRELRGPEESRVDSQYIENLSLVGKSEEVTGKQGQGLKGKVMR
TEEDPGSWAAGGLGAVGNERSTREEKEPRGPSPPARGAPVVPSPCDLFPDALCPMTQIPQ
TQELSSKTLISTREPRHSPEPTSLPDSFPPEESLANTIAHSSQQEGSELKKSTVSDQETE
TFSASVAPPRTPESAAFSPAQVSSPESPPVGFPSRETPRTSLSVDSLSSCGASETLLVAL
HSSLPAVTTQDGASPHSPPANCSGTIPHLRSNSFPGSHRTEQTPGLVGMSLSFSHSELPQ
RPPKPAIPRRDRRSGRDFSVISEFPTSLSTLRQDSQEPTSPERLSSPHSSQPWDSPPDSA
LSPGSPAYGSSPSTVYMEMRIPGSLPPPPLEKSHIHSSMVENDGHLPAVVPTLKRHSHPP
PLSLSSGLHGFPKGPLPQVPDPLVARQHRPLPSTPDNSHHTQTSLANRMRYNKPLPPTPD
MPQSHHSPISSSSISRIYRPLPPVPIMDPSTEPPPLPPKSRGRSRSTQGGLVNSGGQAKP
RPTGQDWAISTAPSTGRTSWPPAIGRSTESLASTSRSKSEVSPGMAFSNMTNLLSPSSPT
SPWTLELQRPTTKDEPGFSEEPEVHARGLLRRSDPQDGSNGQRWSTLGPARQPERPSHPQ
LEKASSWPHRRDTGILPEGSSGQTVVHGEGSNKHKGWNRQGLRRPSILPEGSAVSDSRGS
AMGRSPGPTDTVVFREKKPKEAIGGFSRRCSKLINSSQLLYQEYSDVFLNKEIQSQQRLD
SLAEAPGLTSPRQPRKALVSSESYLQRLSMASSGSLWQEIPVVRNSAVLLSMTHEDQKLQ
EAKFELIVSEASYLRSLHIAVDHFQLSSQLRATLSNQEHQWLFSRLQDVRDVSTMFLSDL
EENFENNIFSFQVCDIVLNHAPDFRRVYLPYVTNQTYQERTFQSLLNSNSNFREVLDKLE
SDPVCQRLSLKSFLILPFQRITRLKLLLQNILKRTQPGSSEEAEATKAHHALEELIRDCN
NNVQRMRRTEELIYLSQKIEFECKIFPLISQSRWLVKSGELTALEFSVSPGMRRKLNTRP
VHLHLFNDCLLLSRPREGNRFLVFDHAPFSSIRGEKCEMKLHGPHKNLFRLFLRHSTQGT
QAEFLFRTETQSEKLRWISALAMPREELDLLECYDSPQVQCLRAYKPRENDELALEKADV
VMVTQQSSDGWLEGVRLSDGEQGWFPVQQVEFISNPEVRARNLKEAHRVKTAKLQLVEHQ
A
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaggagccccagcctggagcctctactcccatccctgccatagaagaattc
agaattatccctgaagccatcatgaggagtagccaaatccctgccatggaccttgaagcc
caagaagaccaggacccaccttataagtgggcagagggacagagactcttgttgacccag
ccaagagagttacagggcatgactgagcatgcagatgagggcaggccctcgttcccagag
gaaaggtctgcagatacagagaccaaccaggaaagccttgtggcagaggcctgggagacc
ccagaacatcaggaggcaatgccccagagcctggcagacagaggatcaatagcaccagct
cccctggagctctggagctgccccatcgagggtgaacagctagacatgttctcagtgtcc
agtgaaatggacagcagaacagaggtgggatttcagccagacctcgcttctttgacattg
ggaattggacaagcaaaagagaaggcagaaacttctcctgacaccttttggcttccctgt
gaagagcaccctgcagagaccagccagactgaggactcaagaggtggaactgtcagccag
gaggagcaggaaggtcaagggcgagaggggctcttacagccccaagagactcaggggttc
gaggagcaggaacaatatgaaatgggatttcaggggaaaggggttctgggggaggatgca
tgttctcatgggctttgtggggagcaggaacagctggtggagcaggttcatggtagagag
agagggcacaggcaaaaacaggagcagatgcaagatgatgggatgcttgggggacaagaa
agaggaggactcgatgggggattggaggtcctgaactgtggtgagcagggtcaacagggg
agggagaggcaggctcagggtcagggaggcctagacgaggaggaacaaaggaagagggag
ttgagggggcctgaagagagtagggtggactctcagtacatagagaacctaagcctagtg
gggaagtcagaggaagtaactgggaagcaaggtcagggtctaaaggggaaagtgatgcgg
acggaggaagatccagggagctgggccgcgggtgggctgggggcagtggggaacgagagg
agcaccagagaggagaaagagcctcgtggtccttccccaccggctcggggagcccctgtg
gtcccttctccctgtgacttatttccagatgccttgtgtcccatgactcagattcctcag
actcaggaactatcctccaaaactctaatttctacacgggagccaagacattcgcccgag
cccacctctctacctgactcctttcctcccgaggagtcactggctaatacaatagctcac
agtagccagcaagaagggtctgagctgaagaagagcacagtatccgaccaggagactgag
acgttctctgcatctgtggctcctcccaggacaccagagtcggccgctttcagtcctgct
caagtctcatcacctgagagtcccccagttggctttcctagcagggagaccccgagaacc
tctctctcagttgacagcctatcttcctgtggggcatcagagactctcctggtggccctt
cacagctccctgcctgcagtgaccacccaggatggggccagccctcacagccccccagcc
aactgcagcgggaccatcccacacctaaggagcaactccttcccgggctcccacaggaca
gagcagactccaggcctggtgggaatgtcactttctttctctcattcagaattaccccag
aggccccccaaacctgccatcccaagaagggacagaagaagtggtagggacttcagcgtc
atttcggaattccccacttcattatccaccctgaggcaggattctcaagaacccacaagt
ccagagagactcagcagtccacacagcagccagccatgggactctccccccgattcagcc
ctttccccaggatctcctgcctatggttcttccccatccactgtctacatggagatgagg
atccctggatctcttcctcctcctcccctagagaagagtcacatccactcttccatggtg
gagaacgacggccatcttcctgcagtggtccccacactgaagcgacacagccatccccct
ccattgtccctaagttcagggctacatggttttcctaaaggcccccttccccaagttcct
gacccccttgtggcaaggcaacaccgacctctgccatctaccccagacaactcccaccat
actcagacctctctcgccaacaggatgagatacaacaagccattacccccaactcctgat
atgccccagtcccaccattctcccatctcgtcttccagtatctcaaggatctacagacct
ctaccccctgtccccattatggatccttccaccgaacctcctccattgcccccaaaatct
agggggaggagcaggagtactcaaggaggacttgtgaattcagggggtcaagccaaacca
agacccactggtcaagactgggcgatctccactgccccctctactggacgtacctcttgg
cccccagccataggcagatcaacagagtctttggcttccaccagtaggagcaagagtgaa
gtgtcccctggcatggccttcagcaacatgacaaaccttttaagtccctcttcccctact
tctccttggactctggagctccaaaggcccaccaccaaggatgaaccagggttctcagaa
gagcctgaggtccatgcaagagggctactgagaagatcagaccctcaggacggaagcaat
ggccaaagatggtctactctcggtccagcaaggcagccagagaggccaagccatccccag
ctggagaaagcatccagctggccccacaggcgggacacagggatactacctgagggcagc
agtggacaaactgtggtccatggcgaggggtccaacaaacacaagggctggaaccggcaa
ggcctgcgcagaccttccatcttgcctgagggctctgcagtttcagattcaagaggttca
gccatgggaagatcccctggccccacagacactgtggttttccgggagaagaaaccaaag
gaggcaataggaggcttttcgagacgctgctccaagctcatcaactcctcccagctgctt
taccaggagtacagcgatgtcttcctgaacaaggagattcagagccagcagcggctggac
agcttggcagaggcccctgggctcacctccccgcggcagcctcggaaggcactggtgtcc
tccgagtcctatctgcagcgcctctccatggcttccagtggctccctctggcaggaaatc
cccgtcgtgcgcaacagtgctgtgctgctctccatgacccatgaagaccaaaaactgcaa
gaggccaaatttgagctgattgtgtcagaggcctcatacctgcgcagtctgcacatagct
gtggatcatttccaactttcaagccaactccgggcgacgctgtccaaccaggaacaccaa
tggctcttctctcgtttacaggatgtgcgagacgtcagcaccatgttcctttcagaccta
gaagagaacttcgagaacaacatcttctctttccaagtgtgtgatatagtcctgaaccat
gccccagacttccgccgggtctacctgccttacgtcaccaaccagacctatcaagaacgc
accttccaaagtctgctgaatagcaacagcaatttccgagaggtcttggacaagctggag
agtgaccctgtctgccagcgcctttccctcaaatcctttctgatcctgcccttccagcgc
atcacccgtctcaagctgcttctccagaacattctgaagagaacacagcctggctcttca
gaagaagcagaggccacaaaggcccaccatgccctggaagagctgatccgagattgcaat
aataatgtccagaggatgcgtcggacggaggaactgatctacctgagccagaagattgaa
tttgagtgcaaaatattcccactcatctcacagtctcgctggctggtaaaaagtggggag
ctgacagccctggagttcagcgtctccccagggatgcgaaggaaactgaacacgcgtccc
gtccacctgcacctcttcaatgactgcctgttgctgtcccggccccgagagggtaaccga
ttcctggtctttgaccacgcgcccttctcctccatccggggggaaaagtgtgaaatgaag
ctacacggaccacacaagaacctcttccgcctcttcttgcggcacagcacccagggcacc
caggctgagttcctcttccgcacagagacacaaagtgaaaaacttcgatggatttcagcc
ttggccatgccaagagaggagttggatctgctggagtgttatgactcgccacaagtccag
tgtcttcgagcctacaagccccgagagaatgacgagttggcactagagaaggcagatgtg
gtgatggtgactcagcagagcagcgatggctggctggaaggtgtgagactctcagatggg
gagcagggctggttcccggtacagcaagtggagttcatttccaaccccgaggttcgtgca
cggaacctgaaagaagcccatcgagtcaagacagccaaactacagctggtggaacatcag
gcctag
DBGET
integrated database retrieval system
