Sciurus carolinensis (gray squirrel): 124991699
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Entry
124991699 CDS
T08117
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124991699
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124991699
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
SPA
MAS20
Motif
Other DBs
NCBI-GeneID:
124991699
NCBI-ProteinID:
XP_047418404
LinkDB
All DBs
Position
1:95757718..95772696
Genome browser
AA seq
1502 aa
AA seq
DB search
MEADAVSEGGAMAEERPPRLVDYFVVAGLAGNGAPIPEETWVPEPSGPLRPPRPAEPITD
VAVIARALGEEVPQGYTCIQASAGGHPLEFSAGLLGGTQPVICYRRGRDKPPLVELGVLY
EGKERPKPGFQVLDTTPYSHSANLAPPGPGHPRTYLTYRRAAEGAGLHALGITDLCLVLP
SKGEGTPHTYCRLSRNLNPGMWGPAVYLCYKVGLAKANTLVYEAELLGRYPEEDNEAFPL
PESVPVFCLPMGATIECWPAQTKYPVPVFSTFVLTGAAGDKVYGAALQFYEAFPRARLSE
RQARALGLLSAVERGRALGGRAVRSRRAIAVLSHWPAFPAFRAFLTFLYRYSVSGPHRLP
LEAHISHFIHNVPFPSPQRPRILVQMSPYDNLLLCQPVSSPLPLSGASFLQLLQSLGPEL
AVTLLLAVLTEHKLLVHSLRPDLLTSVCEALVSMIFPLHWQCPYIPLCPLVLADVLSAPV
PFIVGIHSSYFDLHDPPADVICVDLDTNTLFQTEEKKLLSPRTLPRRPYKVLLATLTTLY
QQLDQTYTGPEEEASLEFLLTDYEAVCGRRARLEREVQGAFLRFMACLLKGYRDFLRPLT
QAPSEGARDVDNLFYLQGFLKSRERSSHKLYSQLLHTQMFSQFIEECSFGSARHAALEFF
DSCVDKVHPEQEKPEMTPLVELEELSGSELTVFITPPEEPPVPEGSESTPQYCYDGFPEL
RAELFESPQEQPGVLPVPGPSRSTPSSPAPRRTKQEMKVAQRMAQKSATMPELWARCLLG
HCYGLWFLCLPAYVRSAPSRVRALHTAYHVLREMESRKVVLPDEVCYRVLMQLCSYYGQP
VLSVRVMLEMRRAGIVPNTITYGYYNKAVLESKWPSGTPGGRLRWAKLRNVVLGAAQFRQ
PLRDRQRQQQQQQVAAHQETSSSQTESYLERPSPTRPLQRQTTWAGRSMRDPASPTGRLV
KSGSLGSARGAQPTVEAGVAHMIEALGVLEPRGSPVPWHDGSLSDLSLTGEELAPGGSPG
GSGLALSAQSSETLEGLSGRGPKAGGRQDEAGTPRRGLGARLQQLLTPSRRSPASRISPS
ELPPDLPPPARRSPMDSLLRPRERPGSTASESSASLGSEWDLSESSLSSLSLRRSSERLS
DTPGSFQPPSLEILLSSCSLCRACDSLVYDEEIMAGWAPDDSNLNTTCPFCACPFVPLLS
VQTLDSRPSAPSPKPAPAGASSSKDAPIPGGPGPVLSDRRLCLALDEPQLCNGHTGGSSR
RVESGAWAYLSPLVLRKELESLVENEGSEVLALPELPAAHPIIFWNLLWYFQRLRLPSIL
PGLVLASCDGPPPPQLPQAPSPWLTPDPASVQVRLLWDILTPDPNSCPPLYVLWRVHSQI
PQRVVWPGPVPACLSLALLESVLRHVGLNEVHKAVGLLLETLGPPPTGLHLQRGIYREIL
FLTMAAMGKDHVDIVAFDKKYKSAFNKLASSMGKEELRQRRAQMPTTKAIDCRKCFGAPL
EC
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagatgcagtgagtgaggggggggccatggcggaggagcggcccccccgactg
gtggattacttcgtggtagctgggcttgcagggaacggagcacctatccctgaggaaacg
tgggttcctgaacccagtgggcccctgcgccctccccggccagctgaacccatcacagat
gtggccgtcattgctagggcactgggcgaggaagtgccccagggctatacgtgcatccag
gcttctgctggtggccaccccttggaattcagtgctgggctcctgggtggaactcaacct
gtcatctgctaccgccggggccgtgacaagccccccctcgttgagttgggggtgttatat
gagggcaaggaacgtcccaagcccggcttccaagtgctcgatactacaccgtacagccac
tcagccaacctggcccctccaggccctgggcatccccgcacctacctcacttacaggcgg
gcagcagagggggcaggactgcatgccctgggcatcactgatctctgcttggtgctgccc
agcaagggtgagggcactcctcatacttactgccggttatcccgcaacctcaaccctggc
atgtggggcccagcagtgtatctgtgctacaaggtgggcctggccaaagccaacacactg
gtgtatgaggcagagctgctgggccgctacccagaggaggacaatgaggcattcccgcta
cctgagtcagtacccgtcttctgcctgcccatgggggccactatcgagtgctggcctgcc
cagacaaagtaccctgtgcccgtcttctccacctttgtgctcacgggtgccgctggtgat
aaggtgtatggtgccgccctgcagttctatgaggcatttccacgagccaggctgtcagag
cggcaggccagggcactgggcctgctgagtgctgtggaacggggccgggctctggggggc
cgcgctgtgcggagccggcgtgccattgctgtgctgtcccactggcctgcctttccagcc
ttcagagccttcctcaccttcctttatcgctactctgtctctggcccccaccgcctgccc
ttggaagcgcacatctcccacttcattcacaatgtccccttcccttccccacagagaccc
cgcatcttagtgcagatgtctccctatgacaacctgctcctctgtcaacctgtatcctca
cccctgcctctcagtggtgccagtttcctgcagctgctacagagcctgggccctgagctg
gctgtcacgcttctgttggctgtgctcacagagcacaaactactggtccactccctgcgg
ccagacctgctcaccagtgtctgtgaggccctcgtctcaatgatcttcccactgcactgg
cagtgcccctacattccgctgtgccccctggtgctggcagatgtactgagcgcccccgtg
cccttcattgtgggtatccactccagctactttgatctgcatgaccctcctgctgatgtc
atctgtgttgatcttgataccaacacgctcttccagacagaggaaaagaagcttctctcc
cctcggaccctgccccgcagaccctacaaggttctactggccacactaacaaccctgtac
cagcaactggaccagacttatactggacctgaggaggaggcatccctggaattcctgttg
acagactatgaggcagtttgtggtcgccgtgcccgcctggagcgggaagtccagggagcc
ttcctgcgctttatggcctgtctgctcaagggctaccgggactttctgcgcccccttacc
caggccccatccgagggggctcgtgatgttgacaaccttttctaccttcagggtttcctc
aagtcccgagaacgctccagccacaagctgtactctcagctgttgcacacgcagatgttc
tcacagttcattgaagaatgttcttttggttctgctcggcatgctgcccttgaattcttt
gactcttgtgtcgacaaggtccacccagagcaggagaaacccgagatgacacccttagtg
gagctggaagaactgtcaggaagtgagctcactgtctttatcacaccccctgaggagccc
ccagtaccagagggcagtgaatccactccccagtactgctatgatgggttcccagagtta
cgggctgagttatttgagtctcctcaagagcaaccaggggtcctgcctgtgccaggccca
tcccgtagcactcccagcagtcccgcccctcgccgtaccaaacaggagatgaaggtggca
cagcggatggcacagaagtcagcaactatgcctgaactgtgggcccggtgcctgctgggc
cattgctatgggctgtggttcctgtgtcttcctgcctatgtgcggtcagcaccctcccga
gtgcgggcactacacacagcgtaccatgtgctacgtgagatggagagccgcaaggtggtg
ctccctgatgaggtgtgttacagggtgctaatgcagctctgctcatattatggacagcct
gttttgtctgtgcgggtcatgttggagatgcggcgggcaggcattgtgcccaacaccatc
acttatggttactacaacaaggctgtgctggaaagcaagtggccgtctggtacaccaggt
ggacgcctgcgctgggccaagctccggaatgttgtcctgggggctgctcaattccgtcag
cctttgagagaccggcagcggcagcagcaacagcagcaggtggcagcacaccaagagacc
agcagttcccagacagagtcctatctggaacgcccatcccccacccgcccccttcagcgt
cagacgacttgggctgggcgaagtatgagggacccagcctcacccactgggcgcctggtg
aagagtggcagcctgggcagtgcccgaggagcacagcccactgtggaggccggtgtggcc
cacatgatagaggccttaggggtcctagaaccccggggatcacctgtaccctggcatgat
ggaagtctctcagacctgagcctgacaggggaggagctggcacctggaggcagtccaggg
ggctcaggcttggccctgagtgcccagtccagtgagaccctggaagggctgagtgggcga
ggacccaaggctggtgggcgtcaggatgaggcaggcaccccccgacgagggctgggtgcc
cgcctccaacagctgcttactccttcccgccgctcccctgcctcccgcatttccccatct
gagctgccccctgacctgcctccccctgcccgtcgcagcccaatggacagccttctgaga
ccccgggagcgtcctggatccactgcatcagagagctcggcctctctgggcagtgagtgg
gacctctcagagtcttctctcagtagcctgagcctccgccgttcctcagagcgcctcagt
gacacccctggatccttccagccaccttccctggaaattctgctctccagctgctccctg
tgccgtgcctgcgattcactggtgtatgatgaggaaatcatggctggttgggcacctgac
gactctaacctcaacacaacctgccccttctgtgcctgccccttcgtgcccttgctcagt
gttcagacccttgattcccgacccagtgcccccagtcccaaacctgcccctgctggtgcc
agcagcagcaaagatgctcctattcctgggggtcctggccctgtactcagtgaccggagg
ctctgccttgccctggatgagccccagctctgcaatggacacacagggggttcctctagg
cgtgtagagagtggtgcatgggcatacctgagtcccctggtgctgcggaaggagctggag
tctctggtagagaatgagggcagtgaggtgctggcattgccagaactgcctgctgcccac
cccatcatcttctggaaccttctatggtatttccaacggctacgcctgcctagtattcta
ccaggcctggtgctggcctcctgtgatgggcccccacccccccagctcccccaggcccca
tctccttggctaacccccgatccagcctctgtgcaggtgcgactgctgtgggatatcctg
actcctgaccccaacagctgcccacctctctatgtgctctggagggtccatagccaaatc
cctcagcgggtggtatggccaggcccagtacctgcatgtcttagcttggcattgctggag
tcagtgctgcgccatgttggactcaatgaggtgcacaaggctgtggggctcttgctggaa
actctagggccccctcctactggcctgcacctgcagaggggtatctaccgcgagatccta
ttcctgacaatggctgctatgggcaaggaccatgtggacatagtggccttcgacaagaag
tacaaatccgcctttaacaagctggccagcagcatgggcaaggaggaattgaggcagcgg
cgggcacagatgcctactaccaaggccattgattgccgaaaatgttttggagcacctctg
gaatgctag
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