KEGG   Sciurus carolinensis (gray squirrel): 124991713
Entry
124991713         CDS       T08117                                 
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124991713
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncar03041]
    124991713
Spliceosome [BR:ncar03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    124991713
 Complex B
    124991713
 Complex C
   U2 SnRNP specific factors
    124991713
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 124991713
NCBI-ProteinID: XP_047418424
LinkDB
Position
8:complement(114713940..114732816)
AA seq 793 aa
MPAGPVQAVPPPPPVVTEPKQPTEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFAKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPASKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAV
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcccccgccgccgcccgtggtcaccgaacccaaa
cagccaactgaagaagaagcatcttcaaaggaggattccaccccttccaagccagtggtt
gggattatttaccctcccccagaagtcaggaatatcgttgacaagactgccagctttgtg
gccagaaatgggcctgaatttgaagctaggatacggcagaatgagattaacaatcccaag
ttcaacttcctaaaccccaatgacccttaccatgcatactaccgccacaaggtcagcgaa
ttcaaggaggggaaggctcaggagccctcagcagccatccccaaggtcatgcaacagcaa
cagcaagccacccagcagcaacttccccagaaggtccaagcccaggtgatccaagagact
attgtgcccaaagaaccccctcctgagtttgagttcattgctgatcccccatccatctca
gccttcgacctggacgtggtgaaactgacagctcagtttgtggccaggaatgggcgccag
tttctcacccagctaatgcagaaagagcagcgcaactaccagtttgactttctccgccca
caacacagcctcttcaactacttcacaaaactggtggagcagtataccaagatcttaatt
ccacccaaaggcttatttgcaaagctcaagaaagaggctgaaaatccccgagaagttttg
gatcaggtatgttatcgagtggagtgggccaagttccaggagcgtgagaggaagaaggaa
gaggaggagaaggagaaggagcgggtggcctatgctcagattgactggcatgattttgtg
gtagtagaaacagtggacttccaacccaatgagcaagggaacttccctcccccaaccaca
ccggaggaactgggggcccgcatcctcattcaggagcgctatgagaagtttggggagagt
gaagaggtagagatggaggttgaatctgatgaggaggatgagaaacaagagaagaccgaa
gagcctccttcccagctggaccaggacacccaagtgcaggacatggatgagggttcagat
gatgaagaagaagggcagaaagtgcccccacccccagagacacccatgcctccacctctg
cccccaactccagaccaagttattgttcgcaaggactatgatcccaaagcttccaagccc
ttgcctccagcccctgctccagatgaatatcttgtgtcccccatcactggggagaagatc
cctgccagcaaaatgcaggaacatatgcgaattgggcttcttgacccccggtggctggag
cagcgggatcgctccatccgggaaaagcagagtgatgatgaggtttatgcaccaggtctg
gatattgagagcagcttgaagcaattggctgagcggcgtactgatatctttggtgtggaa
gaaacagccattggtaagaagattggtgaggaggagatccagaagccagaggaaaaggtg
acctgggatggccactcaggcagcatggcccggacccagcaggctgcccaggccaacatc
accctccaggagcagattgaagccattcacaaggccaagggcctggtgccagaagacgat
actaaagagaagattggccccagcaagcccaatgaaatcccccagcagcctcctcctcca
tcttcagccactaacatccccagttcagccccacctatcacctcagtaccccggccacct
gcgatgccacccccagttcgtactacagttgtgtctgcagtacctgtcatgcccaggccc
ccgatggcatctgtggtacggcttcccccaggctcagtgatagctcctatgccgcctatc
atccatgcacccaggatcaatgtggtgcccatgcctccctcagcacctcctatcatggca
ccccgccctccccccatgattgtgccaacagcctttgtgcctgccccacccgtggctcct
gtcccagctccagcccccatgccccctgtccaccctccacctccaatggaagatgagcct
gcttctaagaagctgaagacggaggatagcctcatgcctgaggaggagttccttcgcaga
aataagggtccagtgtccatcaaagtgcaggtgcccaacatgcaagataagaccgaatgg
aagcttaatgggcaggtgctggtcttcacgctcccactcacagaccaggtctctgtcatc
aaggtgaaaattcatgaggccacaggcatgcctgcagggaaacagaagctacaatatgag
ggcatcttcatcaaggattccaactctctggcttactataacatggctaatggcgctgtc
attcacctggccctcaaggagagaggtggcaggaagaagtag

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