Sciurus carolinensis (gray squirrel): 124991780
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Entry
124991780 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124991780
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncar01007
]
124991780
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124991780
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124991780
Enzymes [BR:
ncar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
124991780
Amino acid related enzymes [BR:
ncar01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
124991780
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124991780
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
124991780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
DUF5915
Motif
Other DBs
NCBI-GeneID:
124991780
NCBI-ProteinID:
XP_047418521
EnsemblRapid:
ENSSCRG00010014228
LinkDB
All DBs
Position
8:89478491..89525829
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AA seq
739 aa
AA seq
DB search
MPSLRPALLRAFRAALLLSLPPRPPVRPSPSLRRPLGTPASAQTSVPAAASRSSMEGTGA
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIID
RSKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDC
TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKSEME
SVLAQLDNYGQQELGDLFVNYNVKSPTTGNDLSPPVPFNLMFKTFIGPGGNMPGYLRPET
AQGIFLNFKRLLEFNQGKLPFAAAQIGNXFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
DHPKFQNVADLCLCLYSAKAQVSGQSARKMRLGDAVEQGVINNSVLGYFIGRIYLYLTKV
GVSPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHARATKVPL
VAEKPLKEPKTVNVVQFEPNKGAVGKAYKKDAKLVMEYLAICDECYITEMETLLNEKGEF
TIETEGKTFQLTKDMVSVKRFQKTLHVEEVVPSVIEPSFGLGRIMYTVLEHTFHVREGDE
QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRNGVSHKVDDSSGSIGRRYAR
TDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPSVVRDLANGSITWVDVE
ARYPLFEGQETGKKETIEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccctctctgcgcccggcgctgcttagagccttccgcgctgctctgctgctgtcgctg
ccgccgcggccccccgtccgaccctcgccctcgctccgccggcccctcggcacgcccgcc
agcgcccagacctcggtccccgccgccgcctcccggagcagcatggagggcaccggggca
gaggaggtgctggcacctctcaggctagctgtgcgccagcagggagatcttgttcgaaag
ctgaaagaagataaagcaccccaagtggatgtagacaaagcagtggctgaacttaaagcc
cggaagagggtattggaagcaaaggagctggcattacagcccaaagatgacattatagac
agatcaaaaatggaagataccttgaagaggaggtttttctatgatcaagcttttgctatt
tatggaggtgttagtggtttgtatgactttgggccagttgggtgtgctttgaaaaacaat
attatccagacctggaggcaacattttatccaagaggagcagattctggagattgactgc
accatgctcacccctgagccagttttaaagacctctggccatgtagacaaatttgctgac
ttcatggtgaaagatgtaaagaatggagaatgttttcgggcagaccatctattaaaagct
cacttacagaaattgatgtctgataagaagtgttctgctgagaagaaatcagagatggaa
agtgtcttggcccagcttgataactatggacagcaagaacttggagatctttttgtgaac
tataatgtaaaatcccccactactgggaatgatctatccccgccagtaccttttaattta
atgttcaagaccttcattggacctggaggaaacatgcctgggtatttgagaccagaaact
gcacaggggattttcctgaatttcaaacgacttttggaattcaatcaaggaaagttgcct
tttgctgctgcccagattggaaatntctttagaaatgagatctcccctcgatctggactc
atcagagtcagagaattcacaatggcagaaattgagcactttgtagatcccagtgagaaa
gaccaccccaagttccagaatgtagcagacctctgcctttgtttgtattcagcaaaagcc
caggtcagcggacagtctgctcggaaaatgcgcctgggggatgctgttgaacagggtgtc
attaacaactcagtattaggctacttcattggccgcatctacctctacctcacgaaggtt
ggagtatctccagataagcttcgcttccggcagcacatggagaatgaaatggcccattat
gcatgtgactgttgggatgcagaatctaaaacgtcctatggctggattgagattgttgga
tgtgctgatcgttcctgttacgacctctcctgtcatgcacgagccaccaaagttcctctt
gttgctgaaaaacctctaaaagaacccaaaactgttaatgttgttcagtttgaacccaat
aagggagcggttggtaaagcgtataagaaagatgcaaagctggtgatggagtacctcgcc
atctgtgatgaatgttacattacagaaatggagacactactgaatgagaagggggaattc
actattgaaactgaagggaaaacatttcagttaacaaaagacatggtcagtgtgaagaga
ttccagaaaacactacatgtggaagaagttgttccaagtgtaatcgagccctcctttggc
ctgggcaggatcatgtacactgtattagaacacaccttccatgtacgagagggagatgag
cagagaacgttcttcagtttccccgctgtggttgctccattcaaatgttccgtccttcca
ctgagccaaaaccaggagttcatgccatttgtcaaggaattatcggaagctctgaccagg
aatggtgtgtctcacaaagtcgatgattcctctgggtcaattgggaggcgctatgccagg
actgatgagattggggtggcttttggcatcaccatcgactttgatacagtgaataagacc
cctcacactgcaactctgagggaccgagactccatgaggcaaataagagcagaggtctct
gaactgcccagtgtcgtccgtgatctggccaatggcagcatcacgtgggttgatgtggag
gccaggtatcctctctttgaaggacaagagactggcaaaaaagagacaattgaggaatga
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