Sciurus carolinensis (gray squirrel): 124991824
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Entry
124991824 CDS
T08117
Name
(RefSeq) homeobox protein cut-like 2 isoform X1
KO
K09313
homeobox protein cut-like
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124991824
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
124991824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
FH2
Motif
Other DBs
NCBI-GeneID:
124991824
NCBI-ProteinID:
XP_047418583
LinkDB
All DBs
Position
8:complement(145376684..145604724)
Genome browser
AA seq
1504 aa
AA seq
DB search
MAANVGSMFQYWKRFDLRRLQKELNSVASELSARQEESEHSHKHLIELRREFKKNVPEEI
REMVAPVLKSFQAEVVALSKRSQEAEAAFLSVYKQLIEAPDPVPTFEVARSLDDRLQPPS
SDPSRQPRRDLHTSWKRHPELLGPKEQKEGTSPAGPTLTEGSRLPGIAGKALLTEALLQR
NEAEKQKGLQEVQVTLAARLGEAEEKIKVLHSALKATQTELLELRRKYDEEAASKADEVG
LIMTNLEKANQRAEAAQREVESLREQLASVNSSIRLACCSPQGPSGEKVSFALCSGPRLE
AALASKDREILRLLKDAQHLRNSLQELEEASANQIADLEQQLTAKSEAIEKLEEKLQAQS
DYEEIKTELSILKAMKLASSTCGLPQPCFLSPQGMAKPDDSLLIAKEAFFPAQKFLLEKP
SLLTSPEEDSPEDDSIKDPLGTEPSYHSPQQLPPPPGPEDPLSPSPGQPLLGPSLGPEGP
RTFSLSPFPSLAPGERLAGDTLLSKHMMPPAAFKGEAGGLLVFPPGFYSTKPPTTPATPA
PGPEPPGAPEPVDGGGSAAGAGAEEEQLDTAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQ
GSVSEILARPKPWRKLTVKGKEPFLKMRQFLSDEQNVLALRTIQVRQRGSITPRIRTPET
GSDDAIKSILEQAKKEIESQKGGEPKTSAAPLSITNGTASTSTSEDAIKNILEQARREMQ
AQQQALLEMEAGPRGRTVPPSPPERPSLAAVSQNGAPAYVKQEDGTGGGSGGTSSSATQT
SLTVLSPAAFVQSIIRKVKSEIGDAGYFDHHWASDRGLLSRPYASVSPSLSSSSSYSGQP
NGRAWPRGDEAPAAPEDEAAGGEDESPRVSELKAEGGAPEVGSGGRLAYYPAYVPRTLKP
TVPPLTPEQYELYMYREVDTLELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRP
KPWSKLTQKGREPFIRMQLWLSDQLGQAVGQQPSASQASPPELRSSPSPPPSPTEPEKSS
QESLSLSLESSKENQQPDGRSGSSLGGKMHAGSQAAGGIQEIVAMSPELDTYSITKRVKE
VLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPFVRMQLWLSDPHNVDK
LRDMKKLEKKAYLKRRYGLISTGSDSESPAARSECPSPCLQPQDPSLPQMKKPRVVLAPE
EKEALRKAYQLEPYPSQQTIELLSFQLNLKTNTVINWFHNYRSRMRREMLVEGTQDEPDL
DPSGGPGVLPPGHSQPDPALQSPDSEAEDQKPTVKELELQGGSEESTMPLTAPDRAHVRI
KQEQSEEEVGSQPQDPGEPEEGQRPPKEEHPDSLSNDGLPTVAPEPLLSDGNTSDCTSLH
PPQEGEAEGRLHSDPLSFKSASESSRCSLEVSLNSPSAASSPGLMMSVSPVPSSSAPISP
SPPGALHAKVPSASPTADSAGALHPSTKVNPNLQRRHEKMANLNSIIYRLERAANREEAL
EWEF
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaatgtgggatcgatgtttcaatattggaagcgatttgatctacggcgactc
cagaaggagctgaattccgtcgcttccgagctgtctgcgcggcaggaggagagtgaacat
tctcataaacatttaattgaactccgtcgggaatttaagaaaaatgtacctgaggaaatc
agagagatggtggctcctgtattgaaaagcttccaagccgaggtggtggcccttagtaag
agaagccaggaggcagaggcggcttttctgagtgtttacaagcaattaattgaagcacca
gaccctgtgcctacatttgaggtggcgcgtagcctggacgacagactgcagccccccagc
tcagaccccagcaggcagccccggcgggacctccacacctcctggaagaggcaccccgag
ctccttggccccaaagagcagaaagaggggacgtctccagccgggcccacgctgaccgaa
gggagccgcctccccggcatcgctgggaaagcccttctgacagaagccttgctgcagaga
aatgaggccgagaaacagaagggccttcaagaagtgcaggtcacgttggcagccagactg
ggggaggcagaggagaagatcaaggtcctacattcagcgttaaaggccacgcagacagag
ctgctagagctgcgtcggaagtacgacgaggaggcagcgtccaaggcagatgaagtcggc
ctgatcatgacgaacctggagaaagctaaccagcgcgctgaagcagcccagcgggaagtg
gagagtctccgggaacagctcgcctctgtcaacagctccatccgcctggcctgctgctcc
ccacagggacccagtggggagaaggtgagcttcgccctgtgctcggggcctcggctggag
gctgccctggcctccaaggacagggagatcctgcggctgctgaaggacgcacagcacctc
cgcaactctctgcaggagctggaagaggcctccgccaaccagatcgcggacctggaacag
cagctcacagccaagtccgaggccatagagaagctagaagaaaagctgcaggcacagtcg
gactatgaggagattaaaacggagctgagcatcctgaaagccatgaagctggcctccagc
acctgcggcctcccgcagccctgcttcctgtctcctcagggcatggccaagcctgatgac
tcgttgctcatagcaaaggaggccttcttcccagcacagaagttccttctggagaagccc
agtcttctgaccagccctgaggaggactctcccgaggacgactccatcaaggaccctctg
ggcacagagccatcctaccactcccctcagcagctgccacctccaccggggcctgaagac
cctctgtcccccagccctgggcagcccctgctgggccccagcctgggacctgaaggccca
cggactttctcgctgtccccgttccccagcctggccccaggggagaggctggccggggac
acgttgctgtccaagcacatgatgcccccagccgccttcaagggagaggcgggtggcctg
ctggtgttccctccaggcttctatagcaccaagccccccacaaccccagccaccccggcc
cctggccctgagccccccggggcccccgagcctgtggacggcgggggcagcgcagcaggg
gccggggcagaggaggagcagctggacacggcagagatagccttccaggtgaaggagcag
ctgctcaagcacaacatcgggcagcgggtgttcggccactacgtgctggggctgtcgcag
ggctccgtcagcgagatcctggcccggcccaagccctggcgcaagctcacggtgaagggc
aaggagcccttcctcaagatgaggcagttcctgtcggacgagcagaacgtgctggccctg
aggaccatccaggtgcggcagcgaggcagcatcaccccaagaatccgcacacctgagaca
ggctcagacgacgccatcaagagcatcctggagcaggccaagaaggagatcgagtcccag
aaggggggcgaacccaagacttcggcagccccgttgagcatcaccaacggcacagcctcc
accagcacctcagaagacgccatcaagaacatcctggagcaagctcgccgtgagatgcag
gcccagcagcaggccctgctggaaatggaggccggaccccggggccgcacggtgccccca
tctcccccagagcggccctcgctggcggctgtgagccagaacggggccccggcctatgtc
aagcaggaagacggcactggaggcggaagtggggggaccagcagcagtgccacacagacg
tccctcacggtcctgtcccccgcggccttcgtgcagagcatcatccggaaggttaagtcg
gagattggcgatgccggctacttcgatcaccactgggcctccgaccgcggcctgctcagc
cgcccctacgcctctgtctcgccctcgctgtcctcctcctccagctactctggccaaccc
aacgggcgggcctggccccgcggagacgaggcccccgctgcccctgaggacgaggcagct
gggggcgaggacgagtcccccagggtcagcgaactgaaggcagaagggggcgcacccgag
gtgggcagtggcgggcggctggcctactacccagcctatgtgccccgcaccctgaagccc
accgtgccaccgctgacgccagagcagtacgagctgtacatgtaccgtgaggtggacacg
ctggagctgacgcgccaggtcaaggagaagctggccaagaacgggatctgccagaggatc
tttggggagaaggtgctgggcctgtcgcagggcagcgtgagtgatatgctgtcccggccg
aagccatggagcaagctaacgcagaaggggcgggagcccttcatccgcatgcagctgtgg
ctctcagaccagctgggccaggccgtgggccagcagcccagtgcctcccaagccagccct
cccgagctgcggtcctcaccatcaccacccccaagccccacagagcctgagaagagctcc
caggagtccttgagcctgtcgctggagagcagcaaggagaaccagcagccggacggccgc
tctggctcctcactaggtgggaagatgcacgcaggcagccaggccgccggaggcatccag
gagattgtggccatgtcccctgagctggacacttactccatcaccaagagggtcaaggag
gtcctcacagacaacaacctagggcagcggctgtttggagagagcatcctgggcctgacc
cagggttccgtgtctgacctgctgtcccggcccaaaccctggcacaagctgagcctgaag
gggagggagccctttgtccgcatgcagctatggctcagtgacccccacaacgtggacaag
ctgagggacatgaagaagctggagaagaaagcctacctgaaacgccgttacggcctcatc
agcactggctccgacagtgagtctccagccgcacgctccgagtgccccagcccctgcctg
cagccccaggacccgagcctcccgcagatgaagaagccccgcgtggtgctggcgcccgag
gagaaggaggcgctgaggaaggcttaccagctggagccctacccctcccagcagaccatc
gagctgctgtccttccagctcaacctgaagaccaacaccgtcatcaactggttccacaac
tacaggtcccggatgcgccgggagatgttggtggagggaacccaggacgagccagacctt
gacccaagtgggggtcctggcgtcctaccacctggccactctcagccggatcctgctctg
cagagccccgactcagaagctgaggatcagaagcccaccgtgaaggaactggagcttcag
gggggctctgaggagagcaccatgcccctgactgcccccgacagggcccacgtgaggatc
aagcaggagcagagtgaggaggaggtgggcagccagccccaggacccaggggagccagag
gaaggccagcgtccccccaaggaggagcaccctgactctctgagtaatgacggactcccc
acagtggccccagagccccttctttcagacggaaacacctcagactgcacctcgctacat
cccccccaggagggtgaggctgaggggcggcttcactcggaccctctaagttttaagtca
gcctcggagtcctcacgctgcagcctggaggtgtcactgaactcgccctcagccgcctcc
tctccgggcctcatgatgtccgtgtcacctgtcccctcctcctctgcccccatctcccca
tccccacccggcgccctccatgccaaagtgccgagtgccagccccactgctgactcagct
ggggccctgcaccccagcaccaaggtgaaccccaatctgcagcggcggcacgagaagatg
gccaacttgaacagcatcatctaccggctagagagggccgctaaccgggaggaggccctg
gagtgggaattctga
DBGET
integrated database retrieval system
