Sciurus carolinensis (gray squirrel): 124991826
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Entry
124991826 CDS
T08117
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124991826
Enzymes [BR:
ncar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
124991826
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124991826
Prokaryotic type
124991826
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
124991826
NCBI-ProteinID:
XP_047418587
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All DBs
Position
8:complement(66274340..66320328)
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AA seq
720 aa
AA seq
DB search
MLIRPCRRLLRVTLAAAALLRPECSAGLFSRPAPRPRSQAPGSLKCFLGALKMEMSEMTG
MSLKRGCLAIEDDDSVAPADETKKQKVSEFCLTQRQSELQNDCLPSRENEPGPPEPASAE
RGKMTSDDQLEEEEEAEEDGLSEEGEEEEEAESFADMMKHGLTELDVGITKFVSSHQGFS
GILKERYSDFVVHEIGKDGQISHLDDLSIPVDEEDPSEDVFTVLTSEEKQQLEELQLFKN
KEASVAIEVIEDTKEKRTIIHQAIKSLYPGLETKTEDREGRKYIVAYHAAGKKALAKVRT
AADPRKHSWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAITVQ
EIAVLKITAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNITGTDDQVQQ
AMNSLKEIGFINYYGMQRFGTTAVPTYQVGRAILQNSWTEVMDLILKPRSGAEKGYLVKC
REEWAKTKDPAAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQS
YVWNNMVSKRIEDYGLKPVPGDLVLKGATATYIEDKDVNNYSIHDVVMPLPGFDVIYPKH
KISEAYREMLTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNT
DVDNLEGKPPPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQMNTTWLR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgctgatccgcccttgccgccgcctcctccgagtgaccctcgctgccgccgccctcctg
cgcccagagtgtagcgccggcctcttctctcggcccgcaccgcgtccgcgctcccaggct
ccgggttctcttaaatgttttcttggagccttaaagatggaaatgtcagaaatgactggc
atgtctctgaaacgtgggtgccttgctatcgaagatgatgacagtgtggccccagctgac
gagacaaaaaaacagaaggtctccgaattctgtctgacccaaagacaaagcgagctgcag
aatgactgcctacccagtagagaaaatgaacctgggccaccagaacctgcaagtgctgag
agaggcaaaatgacttctgatgatcagttggaggaagaggaagaagcggaggaagatggc
ctttcagaggagggtgaggaggaggaggaagcagagagttttgcagacatgatgaagcac
ggacttactgaactagatgtaggcatcaccaagtttgtaagttctcatcaaggattctca
ggaatcttaaaagaaagatattccgactttgttgttcatgaaataggaaaagatggtcag
ataagccatttggatgacttgtctattccagtggatgaggaggatccttcagaagatgta
tttacagttttgacatctgaggaaaagcagcaactggaagagctccagctttttaaaaat
aaggaagccagcgttgccattgaggttattgaggacaccaaagagaaaagaactatcatc
catcaagctattaaatctctgtatccaggattagagacaaaaacagaggatagagaaggg
aggaaatacattgtagcctaccacgcagctggaaaaaaggctttggcaaaggtcagaact
gcagcagatccaagaaaacattcttggccaaaatctaggggaagttactgccactttgtt
ctatataaggaaaacaaagacaccatggatgctattaatgtactttccaaatatttaaga
gtcaagccaaacatcttctcctatatgggaaccaaagataaaagggctataacagttcag
gagattgctgttcttaaaataactgcacaaagacttgcccacctgaataaatgcttgatg
aactttaagctaggaaatttcagctatcagaaaaaccctctgaaactgggagagcttcaa
gggaatcacttcactgttgttctcagaaatataacaggaactgatgaccaagtacaacaa
gctatgaactctcttaaggagattggatttattaactactatggaatgcaaagatttgga
actacagctgtccctacatatcaagttgggagagctattctacaaaattcctggacagaa
gtcatggatttaatactaaaaccccgttctggagctgaaaaggggtacttggtaaaatgc
agggaagaatgggcgaagaccaaggacccagctgctgccctcagaaaactacctgtcaaa
aggtgtgtggaagggcagctgcttcgaggactttcaaaatatggaatgaagaatatagtc
tctgcatttggcataataccaagaaataatcgtttaatgtatattcatagctatcaaagc
tatgtgtggaataacatggtgagcaagaggatagaagattatgggttgaaacctgttcca
ggggaccttgttcttaaaggagccacagccacctatattgaagacaaagatgttaataat
tactccattcatgatgtggtaatgcccttgcctggttttgatgttatctacccaaagcat
aaaattagtgaagcctacagggaaatgctcacagcagacaatcttgatattgacaacatg
agacacaaaattcgagattattccttatcaggggcttaccgaaagatcattattcgtcct
caaaatgtcagctgggaagtagttgcatatgatgatcccaaaattccacttttcaacacc
gatgtggacaacctagaagggaaaccaccaccagtttttgcttctgaaggcaaatacagg
gctctgaaaatggatttttctcttcctccttcaacttacgctaccatggctattcgagaa
gtgctaaaaatggacaccagcatcaagaaccagacccagatgaatacaacctggctccgc
taa
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