Sciurus carolinensis (gray squirrel): 124991851
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Entry
124991851 CDS
T08117
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03022
Basal transcription factors
ncar03420
Nucleotide excision repair
ncar05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124991851
09124 Replication and repair
03420 Nucleotide excision repair
124991851
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
124991851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124991851
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124991851
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124991851
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124991851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
124991851
NCBI-ProteinID:
XP_047418642
LinkDB
All DBs
Position
8:148112280..148130883
Genome browser
AA seq
309 aa
AA seq
DB search
MVSDEDELNLLVIIVDANPIWWGKQALKESQFTLSKCMDAVMVLGNSHLFMNRSNKLAVI
ASHIQESRFLYPGKNGRLGDFFGDSGNLPSELNPSGSKDGKYELLTAANEVIVEEIKDLM
TKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMN
VIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLVQYLLWVFLPDQDQRS
QLILPPPIHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKA
KKKKLKVSA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtctcagacgaagatgaattgaatcttctggttatcatagttgatgccaacccaatt
tggtggggaaagcaagcattgaaggaatctcagtttactttatccaagtgcatggatgct
gtgatggtgctgggaaactcccatttattcatgaaccgttccaacaagcttgctgtgata
gcaagtcacattcaagaaagtcggtttttgtatcctgggaagaatggcagacttggagac
ttcttcggagactctggcaaccttccttctgaattgaatccctccggcagtaaagatgga
aaatacgaactgttaacagcagcaaatgaagttatcgttgaagaaattaaagatctgatg
accaaaagtgacataaagggccaacatacggaaactctgctggcaggatccctggccaaa
gccctgtgctacattcacagaatgaacaaggaagttaaagataatcaggagatgaaatca
agaatattggtgattaaggctgcagaagacagtgcactgcagtatatgaacttcatgaac
gtcatctttgcagcacagaaacagaatattttgatcgatgcctgtgttttggactctgat
tcaggactcctccaacaggcttgtgacatcacaggaggactgtacttgaaggtgccccag
atgccctcccttgtgcagtatctactgtgggtttttcttcctgatcaggatcagcgatct
cagttaatcctcccacccccaattcacgttgactacagggctgcctgcttctgtcatcga
aatctcattgaaattggctatgtctgctccgtgtgtttgtcaatattctgcaatttcagc
cccatctgtaccacttgtgagaccgcctttaagatttctcttcctcctgtactgaaggcc
aagaaaaagaaactgaaagtgtccgcatga
DBGET
integrated database retrieval system
