Sciurus carolinensis (gray squirrel): 124991860
Help
Entry
124991860 CDS
T08117
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04151
PI3K-Akt signaling pathway
ncar04510
Focal adhesion
ncar04512
ECM-receptor interaction
ncar05145
Toxoplasmosis
ncar05146
Amoebiasis
ncar05165
Human papillomavirus infection
ncar05200
Pathways in cancer
ncar05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124991860
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124991860
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124991860
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124991860
09162 Cancer: specific types
05222 Small cell lung cancer
124991860
09172 Infectious disease: viral
05165 Human papillomavirus infection
124991860
09174 Infectious disease: parasitic
05146 Amoebiasis
124991860
05145 Toxoplasmosis
124991860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
LAMB1
Motif
Other DBs
NCBI-GeneID:
124991860
NCBI-ProteinID:
XP_047418648
LinkDB
All DBs
Position
8:complement(68594377..68695088)
Genome browser
AA seq
1797 aa
AA seq
DB search
MQIRLTLFLHLGWLSCSKAQDECDRGACRPTPGNLLLGRSTQLTASSTCGLNGAQKYCIL
SYLEGEQKCFACDSRFPYDPYTQPNSHTIENVITSFEPDRGKKWWQSENGLDHVTIRLDL
EALFQFSHLILTFKTFRPAAMLVERSTDYGHTWKVLRYFAKDCAASFPHVTSGQAQGVGD
LVCDSKYSDIEPSTGGEVVLKVLDPSFEIENPYSPYIQDLVTLTNLRINFTKLHTLGDTF
LGRKQNDSLDKYYYALYEMVLRGSCFCNGHASECDPSQKERGDTFSSPGMVHGRCVCQHN
TEGPNCERCKDFFQDAPWRPAMGSQDSACRSCSCNGHSDRCHFDLAKYLESGGLSGGVCE
DCQHHTEGQHCDRCRPLFYKDPLKAISDPDACLPCECDPDGTVSGGICVSYSDPAVGSVA
GQCLCKENVEGVNCDRCKPNHYGLSASDPLGCQPCNCNPLGSLPLKTCDVDTGQCLCQAY
VTGPHCEECTVGYWGLGDQRPGCSPCDCDIGGAYSNVCSPKDGQCECRPQVTGRSCNEPA
PGYFFAPLNFYLYEAEEATPLQGLAPLILATALPKCDVYFRQQGNDFRIDKGNIILKKNQ
KQSTHAEEQNEVPAVHVVFRELVPGNLVTWTGPGFARVLPGAGLRFAVNNIPFPMDFTIA
IRYETQSAADWAIQILVNPPVGGEYCTHKTPPLKPQSFALPATARIMLLPTPICLEPDVQ
YSVDVYFFQPLESHAHSHILVDSLGLIPQISSLEDFCSKQDMDEYQLHNCVEIASEVGPQ
VLSGACERLVVSMSAKLHNGAVACKCHPQGAVGSSCSRLGGQCQCKPHVVGRCCDRCSAG
SYGLGHHGCHSCHCHPQGSENTVCDQITGQCPCHKEVTGRRCDQCLAGYFGFPNCRPCHC
NGFTELCDPETGSCFNCGGFTTGRNCERCIDGYYGNPSLGQSCRPCLCPNVPSSNQYFAH
SCYQNPWMSNIICNCLQGYAGVQCGECSSGFYGNPSVSGTPCQPCACNNNIDVTDPESCN
RVTGECLRCLHNTQGPNCQLCKPGHFGSALNQTCRRCSCHPSGVSPTVCPPGEGACPCDP
ITGACPCLPNVTGLACDRCADGHWNLVPGRGCQPCDCDHRTSQSSHCDQLTGQCLCKLGY
GGKRCSECQENYYGDPFGQCLPCDCNREGTQKSICDPNTGRCHCREGVSGQRCDQCARGH
SQEFPTCLRCHLCFDQWDQAISSLSKAVQGLMRLAANMEDKRETLPVCEADFKGLRENMT
EIERILKHPVLSSEEFLKVKDYHDSIRKQITHLSEQLKTVYEFQDLKETIVRMRNETDLL
LENVQENIDLQSSLLNASTADSLENIKKYYHISSAAEKKTNKTGSIINNSENTRTSLLTI
LDTLTSKETLSLEKLKQIKIPEIQILNEKVCGEPGNLSCSLSPCGGALCKGTEGHRRCGG
PNCNGSLTLSSNALQKAQETESVVRNLNNQAQGLKNQIKNINKLAEVSKNNVLQLNEKLA
NMKNQSEFEEEKLNLLIKKVKNFLLEENVPPEDIEKVANHVLDIYLPLTSQDLTHELEKI
QKLMQICEDYKTEVNKLKKAAGGAQKLLVKAKAAEKAATVLLNLDKTLNKLQQAQITQGQ
ENSTIAQLAAEITKIKKNVLQAEKQTKKMKNKQLDLAKKLTEQEDGLSLLRTKWQRNQDQ
AGRAKVQAESARRHAGGAEKEFLELKKQYTVIQHEVRATGLTKETIRRVQQLKDAAMKLA
GDTEDKMKRITDLEKKIQDLNLSRQEKADQLKQLEEQVVAIKNEIVEHENKYATCYT
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcgactgaccctgtttttgcaccttgggtggctcagttgctcgaaggctcaa
gatgaatgtgaccggggtgcctgccgtcctacccctggcaatctcctgttgggccgcagc
acacagcttacggcatcttctacctgcgggctgaatggagcccagaaatactgcatcctc
agctacctggagggggaacaaaaatgcttcgcgtgtgactcccgatttccctatgaccca
tacacccagcccaacagtcacaccattgagaatgtaatcacaagttttgaaccagacaga
ggaaagaaatggtggcaatccgaaaatggtcttgatcatgtcaccatcagattggaccta
gaggcgctatttcagttcagccatcttatactgacctttaagacttttcggcctgctgcg
atgttagtggaacgatccacagactatggacatacctggaaagtgctcagatattttgca
aaagactgtgctgcctcctttccgcatgtcacatctggccaggcgcagggagtgggagac
cttgtttgtgactccaaatattctgatattgaaccctcaactggtggtgaggttgtttta
aaagttttggatcccagctttgaaatagaaaatccttacagcccctacatccaggacctt
gtgacattaacaaacctgaggataaactttaccaaactccatacccttggggatactttt
ctgggaaggaagcaaaatgattccctcgataaatactactatgctctgtatgagatggtt
cttcggggaagctgtttttgcaatggccatgccagtgaatgtgacccttcacagaaggag
aggggagacactttcagctccccaggaatggttcacggtcggtgtgtctgtcagcacaat
acagagggcccaaactgtgagagatgcaaggacttcttccaggatgctccatggagacca
gccatgggctctcaggacagcgcatgcagatcatgtagctgtaatggccactctgaccgc
tgtcatttcgatctggccaagtacctggagagcggcggcctcagcgggggcgtgtgcgaa
gactgccagcaccacaccgagggccagcactgcgaccgctgcagaccccttttctacaag
gaccccctcaaggccatctcagatcctgacgcatgcctgccttgtgaatgtgaccctgat
gggaccgtatctggtggcatttgtgtgagctactctgatcctgcggtgggatctgtggcc
ggccagtgcctgtgtaaggagaacgtggaaggagtcaactgcgaccgctgcaaacccaac
cactacggattgagcgcctctgacccgctgggctgtcagccctgcaactgcaaccccctt
gggagtctgccactcaagacttgtgatgtagatacaggtcaatgcttgtgccaggcctat
gtcaccggaccacactgtgaagagtgcactgttggctactggggactgggggatcaacgc
cctggatgttctccctgtgactgtgatattggaggtgcttattccaacgtgtgctcaccc
aaggatgggcagtgtgaatgccgtccgcaggtcactggtcgcagctgcaatgaacctgcc
cccggctacttcttcgcccctttgaatttctatctctacgaggcagaggaagccacgcca
ctccaaggactcgcgcctttgatattagcaacagctttgccaaaatgtgacgtgtatttc
cggcaacaaggaaatgacttcagaattgacaaaggaaatataatactgaagaaaaatcag
aaacaaagcacacatgccgaggaacagaacgaggtgcctgcagttcacgttgttttccga
gagcttgttcctgggaacctggttacatggactggacctggatttgccagagttctccct
ggagctggcttgagatttgctgtcaacaacattccttttcccatggacttcaccattgct
attcgctatgaaactcagtctgcagctgactgggccatccagatcctggttaacccccct
gtggggggcgagtactgtacacacaagactccaccactgaagcctcagtctttcgcctta
ccagcaactgccagaatcatgctgcttcccacacccatctgtttagaaccagatgtacaa
tattccgtagacgtctatttttttcagcctttggagtcccacgctcattctcacatcctg
gttgattctcttggccttattccacaaatcagttcattggaggatttctgcagcaagcag
gacatggatgagtatcagctgcacaattgtgttgaaattgcctcggaagtgggacctcaa
gtgctctctggtgcttgcgaaaggctcgtggtcagcatgtctgccaagctacataatggg
gcagtggcctgcaagtgtcacccccagggtgcagtaggatccagctgcagccgacttgga
ggccagtgccagtgtaaacctcatgtggttgggcgctgctgtgacaggtgctcagctgga
agctatggtttgggacatcatggctgtcactcatgtcactgccatcctcaaggctcagag
aacacagtatgtgaccaaataactggtcagtgcccctgccacaaagaggtgactggccgc
cgttgtgaccagtgcttggcaggctactttgggtttcccaactgccgtccttgccattgt
aatgggtttactgaactttgtgatccagagacagggtcgtgcttcaattgtggaggcttc
acgactggaagaaactgtgaaaggtgcatcgacggttactatggaaatccttctttggga
caatcctgtcgcccttgcctgtgtccaaatgttccctcaagcaatcagtattttgcccat
tcctgttatcagaatccttggatgtcaaatataatctgcaattgtcttcaaggttatgca
ggtgttcagtgtggagaatgctcttctggtttctatggtaatccaagtgtttcaggaaca
ccttgccagccatgtgcctgcaacaacaacatagatgtaactgatccagagtcctgcaac
cgggtaacaggggagtgccttcgatgtctgcacaacacacagggtccaaactgccagctc
tgtaaaccaggtcactttggatcagccctcaatcagacctgcagaagatgctcctgccac
ccttctggagtcagtcccactgtgtgtccccctggtgagggagcttgcccttgtgaccct
atcactggtgcatgcccttgtctaccaaatgtcacaggcctggcctgtgaccgttgtgct
gatgggcactggaatctggtccctggcagaggatgtcagccatgtgactgtgaccaccgg
acctctcaaagtagccactgtgaccagcttacaggccaatgtctgtgcaaactgggctat
ggcgggaaacgctgcagtgagtgccaggaaaattattatggtgacccatttgggcaatgc
cttccatgcgactgcaatagggaaggaacccagaagtccatctgtgacccgaacacaggc
aggtgccactgccgagagggtgtcagtggccagcgatgtgaccagtgtgcccggggtcat
agccaggaattccctacttgtcttcgatgtcacttgtgttttgatcaatgggaccaagcc
atttcttccctctccaaagcagtgcaagggttaatgagactggccgctaacatggaagat
aaaagagagaccctgcctgtctgtgaggccgacttcaaaggcctcagagagaacatgact
gaaatagagaggattttgaaacatcctgttctctcatctgaggaattcttaaaagtcaag
gattatcatgactctattagaaaacaaatcacacatctaagtgaacaattgaaaacagtg
tacgaattccaagatctgaaagaaaccatagtaagaatgaggaatgaaacagacctctta
cttgaaaatgttcaggagaacattgatttgcagtccagccttcttaatgcaagcactgca
gattccttggaaaacatcaagaagtattaccacatatcatcagctgctgaaaagaaaact
aataaaactggttccatcataaataactctgaaaacaccaggaccagcttgcttaccatt
ttagatacactgacctcaaaagaaactttgtcattggaaaagttaaagcagattaagata
ccagaaatccaaatattgaacgagaaggtgtgtggagaaccagggaacttgtcatgtagt
ctctcgccctgtgggggcgctctctgcaagggcactgagggtcacaggcgatgtggtggt
cccaactgtaatggctctctaaccctctcaagcaacgccctccaaaaagcccaggagaca
gaatctgtggttcgtaatttgaacaaccaggctcaaggattgaagaatcagatcaaaaat
ataaataaactggcagaagtctccaaaaacaatgtcttgcagctaaatgagaaactggca
aatatgaaaaaccaaagtgaatttgaagaagaaaaactgaatcttttaatcaaaaaagtg
aagaactttttgttagaggaaaatgtgcctccagaagacatagagaaggttgcaaatcat
gtgcttgacatctacctaccactaacgtcgcaagacctaacccatgaacttgaaaaaata
cagaaacttatgcaaatttgtgaggactacaagacagaagtgaacaagcttaaaaaagca
gcaggtggagcccaaaagcttttggtaaaggctaaagcagctgagaaagcagcaaccgtc
ttgttaaaccttgacaaaacattgaacaagttgcaacaagctcagatcactcaaggacag
gaaaactctactattgcacagctggctgctgagataacaaaaataaaaaagaatgtactg
caggctgaaaagcaaaccaagaaaatgaagaataagcaacttgacttagcaaagaagcta
acagagcaggaggatggactctccctgctgcggaccaagtggcaaaggaaccaagaccaa
gcaggcagggcgaaagttcaggctgaatctgcccgtcgccatgctgggggtgctgagaag
gagtttcttgagctgaaaaaacagtacactgttattcaacatgaggtgcgggctacagga
ctgacaaaggaaacaatcagaagagtccaacagctaaaagatgccgccatgaagttggct
ggggatacagaggacaagatgaaaagaataacagatttagagaagaagatccaagatttg
aatttaagtagacaagaaaaagctgatcaactgaaacaattagaagagcaagttgttgcc
attaaaaatgaaatcgttgagcatgaaaataaatatgccacctgctatacttag
DBGET
integrated database retrieval system