Sciurus carolinensis (gray squirrel): 124991898
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Entry
124991898 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: uracil-DNA glycosylase-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03410
Base excision repair
ncar05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124991898
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
124991898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124991898
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
124991898
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124991898
Prokaryotic type
124991898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
124991898
NCBI-ProteinID:
XP_047418730
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All DBs
Position
8:131143135..131155320
Genome browser
AA seq
313 aa
AA seq
DB search
MIGQKTLYSFFSPTPARKRGAASPEQADPGTGVAAVTEENGDAAATPTKKARTEQEEPGT
PPSSPLSQEQLVRIQXNKAAALLRLAARNVPVGFGESWRKQLSGEFGKPYFIKLMGFVAE
ERKRYTVYPPPHQVFTWTQTCDIRDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLE
NIYKELSSDIDGFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVS
WLNQNLNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKANELL
QKSGKKPIDWKEL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgattggccagaagaccctgtactccttcttctccccgacccccgccaggaagcgaggt
gccgcaagccccgagcaggccgacccgggcaccggcgtggcagcagtaactgaggagaac
ggcgatgcagcggcaaccccaaccaagaaggcccggaccgagcaggaggagcccggcacg
ccgccctcctcgccgctgagccaagagcagttggtccgcatccagnaaaacaaggccgcg
gcgctgctgagactcgcggcccgcaacgtgccggtgggctttggcgagagttggaggaag
cagctcagcggagagttcgggaagccgtatttcataaagctaatgggatttgttgccgaa
gaaagaaaacgttacactgtttatccacctccgcaccaagtcttcacgtggacccaaacc
tgtgacataagggatgtgaaggttgtcatcctgggacaagatccttatcatggacccaat
caagctcatgggctctgctttagtgtccaaagacccgttccacctccgcccagtttggaa
aacatttataaagagctgtcttcagacattgatggttttgttcaccctggccatggagat
ttatcaggatgggccaaacaaggtgtcctcctgctcaacgctgtgctcaccgtccgggcc
catcaagccaattcccataaggagaggggctgggagcagttcacggacgcggtcgtgtcc
tggctgaaccagaacctgaacggcctcgtcttcctgctctggggctcttacgctcagaag
aagggcagtgccatcgacaggaagcggcaccatgtactgcagactgctcatccttccccg
ctctctgtgtatagagggttctttgggtgtcgacatttttctaaagccaatgagcttctg
cagaaatctggcaagaagcccatcgactggaaggagctgtga
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integrated database retrieval system
