Sciurus carolinensis (gray squirrel): 124991947
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Entry
124991947 CDS
T08117
Name
(RefSeq) nuclear receptor corepressor 2 isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04330
Notch signaling pathway
ncar05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124991947
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
124991947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124991947
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
124991947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
DnaT
Motif
Other DBs
NCBI-GeneID:
124991947
NCBI-ProteinID:
XP_047418827
LinkDB
All DBs
Position
8:complement(138089581..138226837)
Genome browser
AA seq
2559 aa
AA seq
DB search
MSGSTQPVAQTWRATEARYPPHGISYPVQISRPHADVGLLEYQPARDYASHLSPGAMMQP
PRRRPSLLSEFQPGSERSQELHLRPESHAYLPELAKSEMEFMESKRPRLELLPEPLLRPS
TLLASGQPGGSEDLTKERSLTGKLEPVSPPSPPHADPELELLPPRLSKEELIQNMDRVDR
EISMVEQQICKLKKKQQQLEEEAAKPPEPAKPVSPPPLESKHRSLVQIIYDENRKKAEAA
HRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQR
YDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSGL
SMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVVPPMLFDADQQRIRFINMNGLMDDPMK
VYRDRQVTNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKS
LVRRSYRRRGKSQQQQQQQQQQQQQMPRGGQEEKEEKEKEKEAEKEEEKPDLDQDREELA
KEKTEDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEASHEEAATPQQSAELAS
LEMNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEIL
QQHKLKMEKERNARRKKKKAPAAASEETAFPPVVEDEEMEASGASGNEEEMAEEAEAVPA
SGSEVSRGECSGPAAVTNGSDTESVPSPRAEAAKDLGQNGPQAPPALGAEGTPTEPPTPP
PEDAPAPAQPAPAVDASGPPTPPPAPSSPTAPPPVAPEEEKEEETTAAPPAEDGEEEKPP
AAEEPEGDAGKMEESGSVPEEPVQADRKEEAEEEDPDKARGAEASTEAVPAGPLKAEKKE
GGGGRAPARASGAPQDSDSSATCSADEADEPEGGDKHRLLSPRPRLLTPTSDPRANTSPQ
KPLDLKQLKQRAAAIPPIQVTKVLEPPREEPAPPTPQHLPPECDSPPQPCGSPRGCGSRS
PAPPREQEEKPAFFPTFAAEGQKLPAEPPCWTSGLPFPVPPREVIKASPHAPDPSAFAYA
PPGHPLPLGLHDSARPVLPRPATVCNPPPLISSRHPGVLERHLAATSQVCGRVDGSALTR
DPCDPPALQGVSVQLHVPYSEHAKAPVGPVGVGLPLTVDPKKLAPFSAVKQEQLSPRGQA
GPPESLGAPTAQEMSVLRGTALGSVPGGSITRGIPSTRVPSESPSTYRGSITHGTPADVL
YKGTITRIIGEDSPSRLDRAREDSLPKGHVIYEGKKGHVLSYEGGMSVSQCSKEDGRSSS
GPPHETAAPKRTYDVMEGRVGRAIPSAGIEGLMGRAIPPERHSPHLKEQHHSRGSITQGI
PRSYVEAQEDYLRREAKLLKREGTPPPPPPPPRDLAEAYKTRPLEALGPLKLKPAQEGLV
ATVKEAGRSIHEIPREELRRTPELPLAPRPLKEGSITQGTPLKYDSGASSTGTKKHDVRS
IIGSPGRTFPPVHPLDVMADARVLERTCYEESLKGRPGTVGSAGGSITRGAPVIVPELGK
PRQSPLAYEDHGAPFASHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREVAKS
PHSTVPEHHPHPISPYEHLLRGVSGVDLYRGHIPLAFDPTSIPRGIPLEAAAAYYLPRHL
APNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAASAMAQRADMLRGLSP
RESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPTAAVDRLAYLPTAPAPFSSRHSGS
PLSPGGALTKPAGAASSERERDRDRERDKSILTSTATVEHAPIWRPGTEQSSSSNGSGGR
PAPHPHQLSPISPRTQDALQQRPSVLHNAGPKGTAASLESSTPTVLRCTSTSSPVRPAAS
FPPATHCPLGGALDGVCPTLMEPVLLPKEAPRAPRPERPRADAGHAFLPKPLAREPASSP
GKSSEPRPLAPPGSSHAATARAPAKSLAAQHASPDPPAPPASACDAHREKTQSKPFSTQD
LELRALGKTTLTAATFIDAIIMRQIAHDKGPREGGSLANDSPRDGYHGGYSPEGVEPISP
VSSPSLTHDKGLPKHLEELDRSHLDAELRHKQPGPAKLGPEAAHLPHLRPLPESQSVSSP
LLQTAPGVKGHQRVVTLAQHISEVITQDYTRHHPQQLSAPLPAPLYSFPGASCPVLDLRR
PPGDLYLPPPDHGAPARGSPHSEGGKRSPEPSKTSVLGNEDSIEPVSPPEGMTEPGHPRS
AIYPLLYRDGEQAEPSRMGSKSPGNTSQPPAFFSKLTESNSAMVKSKKQEINKKLNTHNR
NEPEYNIGQPGTEIFNMPAITGAGLMTCRSQAVPEHASTNLGLEAIIRKALMGKYDQWEE
PPPLGANAFNPLSASASLPAAAMPITAADGRSDHTLTSPGGGGKAKVSGRPSSRKAKSPA
PGLACGDRPPSVSSVHSEGDCNRRTPLTSRVWEDRPSSAGSTPFPCNPLFIRLQAGAMAS
PPPPGLPAGSGPLAGPHHAWDEEPKPLLCSQYETLSDSE
NT seq
7680 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatccacgcagcccgtggcacagacgtggagggccaccgaggcccgctacccg
ccccacggcatctcctaccccgtgcagatctcccgaccccatgcggacgtggggctgctg
gagtaccagcccgcccgggactacgcctcgcacctgtcgcccggcgccatgatgcagccc
ccgaggaggaggccctccctgctgtccgagttccagcccgggagcgaacggtcccaggag
ctgcacctgcgccctgagtcccacgcgtacctgcccgagctggccaagtcggagatggag
ttcatggagagcaagcgcccgcgcctggagctgctccccgagcccctgctgcggccgtcc
accctgctggcctcgggccagcccggcggctctgaggacctcaccaaggagcgcagcctg
acgggcaagctggagcctgtgtcgccccccagccccccgcacgccgaccctgagctggag
ctgctgccgccccggctgtccaaggaggagctgatccagaacatggatcgcgtggaccgc
gagatcagcatggtggagcagcagatctgcaagctgaagaagaagcagcagcagctggag
gaggaggccgccaagccgcccgagcccgcgaagcccgtgtcgcccccgccgctggagtcc
aagcaccgcagccttgtgcagatcatctacgacgagaaccggaagaaggccgaggctgcg
catcggatcctggaaggcctggggccccaggtggagctgccgctgtacaaccagccctcg
gacacccggcagtaccacgagaacatcaagataaaccaggcgatgcggaagaagctcatc
ctgtacttcaagcgcaggaaccacgctcggaagcaatgggagcagaagttctgccagcgc
tatgaccagctcatggaggcgtgggagaagaaggtggagcgcatcgagaacaacccccgg
cgccgcgccaaggagagcaaggtgcgcgagtactacgagaagcagttcccggagatccgc
aagcagcgggagctgcaggagcgcatgcagagcagggtgggccagcggggcagtgggctc
tccatgtcggctgcgcgcagtgagcacgaggtgtctgagatcatcgacggcctctcagag
caggagaacctggagaagcagatgcgccagctggccgtggtcccgcccatgctgttcgac
gcggaccagcagcgcatccggttcatcaacatgaacgggctcatggacgaccccatgaag
gtgtaccgggaccgccaggtcaccaacatgtggagcgagcaggagaaggagaccttccgc
gagaaattcatgcagcaccccaagaactttggcctgatcgcttcgtttctggagaggaag
acggtggccgagtgtgtcctctactactacctgaccaagaagaacgagaactacaagagc
ctggtgaggcgcagctaccggcgccggggcaagagccagcagcagcagcagcagcagcag
cagcagcagcagcagatgcctcggggcggccaggaggagaaggaggagaaggagaaggag
aaggaggcggagaaggaggaggagaagcccgacctggaccaggaccgggaggagctggcc
aaggagaagaccgaggatacttctggggaggacaacgatgagaaggaggccgtggcctcc
aaaggccgcaaaactgccaacagccagggccgccgcaaaggccgcatcacgcgctccatg
gccaacgaggccagccacgaggaggctgcgacccctcaacagagcgccgagctggcttcc
ctggagatgaacgagagctctcgctggaccgaggaggagatggagacggccaagaaaggt
ctcctggagcatggccggaactggtcggccatcgcccggatggtgggctccaagaccgtg
tcccagtgtaagaacttctacttcaactacaagaagcggcagaacctggacgagatcctg
cagcagcacaagctgaagatggagaaggagaggaatgcccggaggaagaagaagaaagcc
ccggccgcggccagtgaggagacggccttcccgcccgtggtggaggacgaggagatggag
gcctcgggcgccagtgggaacgaggaggagatggcagaggaggccgaagctgtgcccgcc
tctggcagtgaggtgtcccgaggggaatgcagcggcccagccgccgtcaccaacggctcc
gacacagagagcgtcccctctccacgcgccgaggctgccaaggacctggggcagaacggg
ccccaagccccacctgccctgggtgccgaggggacgcccaccgagccacccacccctcca
cctgaggacgccccggcccccgcccagcccgccccagccgtggacgccagtggccccccc
acgcccccaccagctccctcgtcacccactgcaccccctcctgtggcccccgaggaggag
aaggaggaggagaccaccgcggcacccccagcggaggacggagaggaagagaagccccct
gcagctgaggagcccgagggggatgcggggaagatggaagagtctgggtcggtgcctgag
gagcccgtccaggctgaccgaaaggaggaggccgaggaggaagacccggacaaggcccgg
ggtgcagaggccagcacggaggctgtgcccgcggggccactcaaggcggagaagaaggag
ggcgggggcggcagagcccctgccagggcctcgggcgccccccaggacagcgactccagc
gccacgtgcagcgcagacgaggcagacgagcctgagggaggagacaagcaccggctgctg
tccccgaggccccgtctcctcactccgaccagtgaccccagggccaacacgtcaccccag
aagcctctggacctgaagcagctgaagcagcgggcggccgccatcccccccattcaggtc
accaaggtcctcgagccaccccgggaggagccggcgccccccaccccgcagcacctgcct
ccggagtgcgacagccccccgcagccctgcggcagccctcgaggctgcggcagcaggagc
cccgcgcccccccgcgagcaggaggagaagcctgcatttttcccaaccttcgcggccgag
ggccagaagttgcccgcagagcccccttgctggacctcgggcctgcccttccccgtgccc
cctcgggaggtgatcaaggcctccccgcacgccccagacccctccgccttcgcctatgct
ccacccggtcacccgctgcccctgggcctccatgacagcgcccggccagttctgccacgc
cctgccaccgtctgcaacccgccgcccctcatctcctccaggcaccctggcgtcctcgag
aggcacttggctgccacctcccaggtatgtggcagggtggacggcagtgctctgacgcgg
gacccctgtgacccccctgccctgcagggagtgtctgtccagctccacgtcccgtactca
gagcacgccaaggcccccgtgggccccgtcggcgtggggctgcctctcaccgtggacccc
aagaagctggcacctttcagtgcagtaaagcaggagcagctttccccacggggccaggct
ggtccccccgagagcctgggagcacctacagcccaggagatgtctgtgctgagagggaca
gccctgggctcggtcccaggcgggagcatcaccagaggcatccccagcacacgggtgccc
tccgagagccccagcacctaccggggctccatcacccacggcaccccagctgatgtcctg
tacaagggcaccatcaccaggatcatcggtgaggacagcccaagtcgcctggaccgggcc
cgggaagacagcctgcccaagggccacgtcatctacgaaggcaagaagggccacgtcctg
tcctacgagggtggcatgtctgtgtcgcagtgctccaaggaggacggccggagcagctca
gggccaccccacgagacggccgcccccaagcgcacctacgacgtgatggagggccgggtg
ggcagagccatcccctcagcaggcatcgagggtctcatgggccgggccatccctcccgag
cggcacagcccccacctcaaggagcagcaccacagccgaggctccatcacgcaagggatc
ccacggtcctacgtggaggcccaggaggactacctgcgccgggaggccaagctcctgaag
cgcgagggcacgccgccgccacccccaccgccgccgcgggacctggccgaggcctacaag
acccggcccttggaggccctgggccccctgaagctgaagccggcccaggagggcctggtg
gccaccgtgaaggaagccggccgctccatccacgagatcccccgcgaggagctgcggcgc
acgcccgagctgcccctggccccacggccgctcaaggagggctccatcacacagggcacc
cccctgaagtacgactcgggcgcgtcctccaccggcaccaagaagcacgacgtgcgctcc
atcatcggcagccctggccgcaccttcccaccggtgcacccgctggacgtgatggcggat
gcccgggtgctggagcgcacctgctacgaggagagcctgaagggccggccgggcaccgtg
ggcagcgccgggggctccatcacccgcggggccccagtcatcgtgcccgagctgggcaag
ccgcggcagagccccctggcctacgaggaccacggggcccccttcgccagccacctgccc
cgtggctcgcccgtgaccacccgggagcccacaccacgcctgcaggaaggcagcctgtcc
tccagcaaggcgtcccaggaccggaagctgacctcgacgccccgagaggtggccaagagc
ccacacagcacggtgcccgagcaccacccacaccccatctcgccctacgagcacctgctg
cggggcgtgagcggcgtggacctgtaccgagggcacatcccgctggccttcgaccccacc
tccataccccgcgggatccctctggaagcagccgctgcctactacctgccccggcacctg
gcccccaaccccacgtacccgcacctgtacccgccgtacctcatccgcggctacccggac
acggcggcgctggagaaccgccagaccatcatcaacgactacatcacctcgcagcagatg
caccacaacgccgccagcgccatggcccagcgcgccgacatgctgcggggcctctcgccc
cgggagtcctcgctggcgctcaactacgccgccggcccgcgaggcatcattgacctgtcc
caagtgccacacctgccagtgctggtgcccccgacaccaggcacccccacggctgccgtg
gaccgcctggcctacctgcccacggcgcccgcgcccttcagcagccggcacagcggctcc
ccgctgtccccaggaggtgccttgaccaagcccgcgggcgcagcctcgtcggagcgggag
cgggatcgggatcgcgagcgggacaagtccatcctcacgtccacggcgacggtggagcac
gcgcccatctggagacccggtaccgagcagagcagcagcagcaacggcagcggcggccgc
cccgccccccacccccaccagctctcgcccatctccccccggacgcaggacgccctgcag
cagaggcccagcgtgctgcacaacgcaggcccgaagggcaccgccgcctccctggagtcc
agcacgcccacggtcctgaggtgcacctccacctcctcacccgtccgcccagctgccagc
ttcccccccgccacccactgcccgctgggtggcgccctcgatggggtctgcccaaccctg
atggagccggtcctgctgcccaaggaggcgccacgggccccacggccggagcggccccgc
gcggacgccggccacgccttcctccctaagcccctggcccgcgagcctgcctcctccccc
ggcaagagctccgagccccggcccctcgcgccccccggctccagccacgcggccaccgcc
cgcgccccagccaagagcctcgcagcccagcacgccagcccggacccgccggccccgccc
gcctcggcctgcgacgcgcaccgggaaaagactcaaagtaaacccttttccacccaggat
ctggagctgcgcgctctgggtaagaccaccctgacagcggccaccttcatagacgcgata
atcatgcgtcaaattgctcacgataaggggccgcgagaaggaggttcgctggccaacgac
tcccctcgcgatggctaccacggtgggtacagccccgagggggtggagcccatcagccca
gtaagctcgcccagcctgacccacgacaaggggctccccaagcacctggaggagctggac
aggagccacctggacgccgagctgcgacacaagcagccaggccccgcgaagctcggccca
gaggccgcccacctcccacacctgcggccactgcccgagagccagtccgtgtccagcccg
ttgctccagactgcccctggggtcaaaggtcaccagcgggtggtcaccttggcacagcac
atcagcgaggtgatcacgcaggactacacccgccaccacccgcagcagctcagcgcgccc
ctccccgcccccctctactccttccctggagccagctgccccgtcctggacctccgccgc
ccacccggtgatctctacctcccaccccccgaccatggcgccccggcccgcgggtccccc
cacagcgaagggggcaagaggtctccagagccaagcaagacgtcagttctgggcaatgag
gacagcattgaacctgtgtccccaccggagggcatgacagaaccaggccacccccggagt
gccatctaccccctgctatatcgggatggggagcaggcagagcccagcaggatgggctcc
aagtccccagggaacaccagccagccgccagccttcttcagcaagctgactgagagcaac
tcggccatggtcaagtcgaagaagcaggagatcaacaagaagctgaacacgcacaaccgg
aacgagccggaatacaatattggccagcccgggacagagatcttcaacatgcccgccatc
accggagcaggcctcatgacctgtagaagccaggcggtgccggagcacgccagcaccaac
ctggggctggaggccataattagaaaggctctcatgggtaaatatgaccagtgggaggag
cccccgccgctcggcgccaatgcttttaaccctctgagtgccagtgccagtctgcccgct
gccgctatgcccataactgctgctgacggacggagcgaccacacgctcacctcgccaggt
ggaggcgggaaggccaaggtctctggcagacccagtagccgaaaagccaagtccccagcc
ccgggcctggcgtgcggggaccggccgccctctgtctcctcggtgcactcagagggagac
tgcaaccgccggacaccgctcaccagccgtgtgtgggaggaccggccctcgtctgcaggt
tccacacccttcccctgcaacccgctgttcatacggctgcaggcgggcgccatggcctcc
ccgcccccgccaggcctccctgcgggcagtgggcccctggccggcccgcaccacgcctgg
gacgaggagcccaagcctctgctgtgctcacagtacgagacgctctccgacagcgagtga
DBGET
integrated database retrieval system
