Sciurus carolinensis (gray squirrel): 124992316
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Entry
124992316 CDS
T08117
Name
(RefSeq) CD166 antigen isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124992316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124992316
04090 CD molecules [BR:
ncar04090
]
124992316
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
ALCAM
124992316
CD molecules [BR:
ncar04090
]
Proteins
124992316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
Ig_2
I-set
ig
V-set
C1-set
Izumo-Ig
DUF6377
Podoplanin
FixQ
Amnionless
PepSY_TM
FeoB_associated
Motif
Other DBs
NCBI-GeneID:
124992316
NCBI-ProteinID:
XP_047418963
EnsemblRapid:
ENSSCRG00010020593
LinkDB
All DBs
Position
9:complement(88032029..88213236)
Genome browser
AA seq
583 aa
AA seq
DB search
MASKASPSSRLVFCLLISAAILRPGLGWYTVNSAYGDTIIMPCRLDVPQNLMFGKWKYEK
PDGSPVFIAFRSSTKKSVQYDDVPEYKDRLSLSENYTLSISNAKISDEKRFVCMLVTEDN
VFEAPTVVKVFKQPSKPEIVSKAPFLETEQLKKLGNCISKDSYPDGNITWYRNGKVLQPL
EGAVVIIFKKEMDPVTQLYTMTSSLEYKTSKADVQMPFTCSVTYYEPSGQKTIHSEQAIF
DIYYPTEQVTIQVLPPKTAIKEGDNITLKCMGNGNPPPEEFLFYLPGQPEGIRSSNTYTL
TDVRRNATGDYRCSLIDKKSMTASTAITVHYLDLSLNPSGEVTKQLGDALPVSCTISASR
NATVVWMKDNIRLRSSPSFSSLHYQDAGNYVCETALQEVEGLKKRESLTLIVEGKPQIKM
TKKTDPSGLSKTIICHVEGFPKPAIQWTITGTGSVINQTEESPYINGRYYSKIIISPEEN
VTLTCTAENQLERTVNSLNVSAISIPEHDEADEISDENREKVNDQAKLIVGIVVGLLLAA
LVAGVVYWLYMKKSKTASKHVNKDLGNMEENKKLEENNHKTEA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaggcgtccccctccagccgtctggttttctgcctcttgatctctgctgcg
atcctcaggccaggccttggatggtatactgtaaattcagcatatggagataccattatc
atgccttgccgactcgatgtacctcagaacctcatgtttggcaaatggaaatatgaaaag
cctgatggctccccagtatttattgccttcaggtcctctacaaagaaaagtgtgcagtat
gatgatgtaccagaatacaaagacagattgagcctctcagaaaactacaccttgtctatc
agcaatgcaaagatcagtgatgaaaagagatttgtgtgcatgctggtgactgaggacaac
gtgtttgaggcacctacagtagtcaaggtgttcaagcaaccatctaaacctgaaattgta
agcaaagcaccatttctggaaacagagcagcttaaaaagttgggaaactgcatttcaaaa
gacagttacccagatggaaacatcacatggtacagaaatggaaaagtgctacaacccctt
gaaggagcggtggttataatttttaaaaaggagatggatccagttactcagttgtatacc
atgacttcatctttggaatataagacaagcaaggctgatgtacaaatgccattcacctgt
tctgtgacatattatgaaccatctggccagaaaaccatccattctgaacaggcaatcttt
gatatttattatcctacagagcaggtgacaatacaagtgttgccaccaaaaactgccatc
aaagaaggggacaacatcactcttaagtgcatggggaatggcaatcctcctcccgaggag
tttttgttttacttaccaggacaacctgaaggaataagaagctcaaacacatacactttg
acagatgtgaggcgcaatgcgacaggagactacagatgctccctgatcgacaaaaaaagc
atgactgcttccacggccatcacagtccactatttggatttatccttaaacccaagtggg
gaagtgaccaagcagcttggtgatgcgctgcctgtgtcgtgcacaatatctgctagtagg
aatgcaactgtggtttggatgaaagataacatcaggctccgttcaagtccatcattttct
agtcttcattatcaggatgctggaaactatgtctgtgaaactgctctgcaagaggttgaa
ggattgaagaaaagagagtcactaacactcattgtagaaggaaaacctcaaatcaaaatg
acaaagaaaacagatcccagtggactatctaaaacaataatctgccatgtggaaggtttt
ccaaagccagctatacagtggacaattacaggcactggaagcgtcataaaccaaacagag
gagtctccttatatcaatggcaggtattatagtaaaattatcatttcccctgaagagaat
gttacattaacttgcacagcagaaaaccagctggaaagaacagtaaactccttgaatgtc
tctgctataagtattccagaacacgatgaggcagacgagataagtgatgaaaacagagaa
aaggtgaatgaccaggcaaagctaatcgttggaattgttgttggtctcctccttgctgcc
cttgttgctggtgttgtctattggctgtacatgaaaaaatcaaagactgcatcaaaacat
gtaaacaaggaccttggtaatatggaggaaaacaaaaagttagaagaaaacaatcacaaa
acagaagcctaa
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