Sciurus carolinensis (gray squirrel): 124992394
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Entry
124992394 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 44-like
KO
K24224
cilia- and flagella-associated protein 44
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124992394
Cilium and associated proteins [BR:
ncar03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
124992394
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Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
124992394
NCBI-ProteinID:
XP_047419074
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Position
9:79294991..79444407
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AA seq
1839 aa
AA seq
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MKEPDDQDTEGGKSDRSKSSGKQSLKSESRYGFEDTTDDTFTEGEESYLEEDSDLEDLEG
SSSSLPYDYVESKKASQEPPGLDAEEAEEELKKKISESFFYDYMELASMPFVTPDSNIPL
DFLVLIHSFGYDCRKRANLQLLDSSTLMYIAGNQLILLNFKTKEQTYLRSSSGQGIGVIG
VHPYKTYFTVAEKGSFPNIIIYEYPSLKPYRILRDGTEKAYAYVDFNYNGTLLASVGSSP
DYTLTIWNWKDEQPILRKKAFSQDVFKVTFNPEDDEQLTTAGSGHIKFWEMAYTFTGLKL
QGSLGRFGKTTTTDIEGYIELPDGKVLSGTEWGNLLLWEGSLIKVELCRTGMKSCHHGSI
NQIMLDEGEVITAGSDGCIRIWDFETIDTADIIDDTGLLEIEPINELQVDKNVNLFSLIK
INTPGYNLWLAQDSNGAIWKLDLSFSNITHDPECLFSFHSEAIEAVATSPLTYLMATTAL
DCSVRIYDFASKNSLAQMKFKQGGTALTWVPRIVSYSGAQIAVGFEDGVVRILELYDPKG
LTIFAGRKKVPDVDIYLRQVFKPHTAQVTALAYERDAEVLATGSKDHTVFFFEVEKDYKP
IGFINTPGPVCQLIWSSVLHPDSTLLILCENGYVLEAPCPTIKEEEDDHDVVSYEISDMC
LKCFHFTSVKSKILRSIEIEKREKQKELKAQEREARRKKLIEEMGEDAEKELQEEEEEEE
EEPLPELFIPPNPSPILCGFYSEPGKFWVSLGDYDSGFLYHCEFPSCDKRSNFEEQKDEP
FDFRFLENTEDNPIQTITFSFSQTMMFCGMRNGAVRVYIRSHDDHSLTNLDYYWHFNMHD
NDYGYVKSMATSFDDRFLITAGADNNIFVFNVYSELEFLKIIKAKVPSPKFGIETEPSPE
DIEDPKAYSIENARRKREHDKLMKEMEELKAGKREQIRALRNEFWKLLEMNKELPXHMQF
KRTDFDLDSKIRADIDRKTVYKIHQVEKELAWEKEKHELGLMKLQNRFRDPLENDTIVVY
AIQTDHKISSYRLVKPSKYSKYKRTSQSERKPSKLERFEKEGSGKRDSQKDTGESIIIQE
ETMIEKGKIFRPRTLSEIMIDNQIEKTRKLIQKAERAQLKIQQRKKEWEELYKSKPDEDY
EDPKDVQAIKEAQVYMGDFNLKTAPDYKIPEHMRINAAKKEEELGHLVSLVHGKKMHMNK
CILSLRDLKVAVIEEIQCLVQELKSIQSTLHISKHIPIPQVPQIHPEEVPEKRFHYDEEI
LKKFKRQRMKIEVQKRSHMDQIVSTNAGRGFLKLPSGKDGDVTTRDSLSRSSRASTFSLE
LPKPPEFEKTEPTEVELEIMKRDEIKHLYTQEYLTNRIKELTVTFDAELRLLRHQKLKLD
TQMKLSDLHHVTLFQEILLLKNFEKQENILQERVNSCDKEEQDMQWKINELLKEMEERKN
EITKLQEQEKALYAGFQAALGENNKFANFLLKVLKKKIKRVKKKEVEGDADEDEESEESS
EDESSLESDEEESGSEDEXFDDSICPTNCDKALFELALQLREKRLDIEEALVEEKKTVDN
LKKEYDTLSKKVKIVATNLNAAEEALEAYQREKQQQLNELLVVFPLKLHQVEYMQSGEIP
HDLSGTLVFSNLSLGRLQARIIQLHEENIKQQKLNKECRERRKRLIREKRQMAKTIRKME
ETVRQLMIDKFGRVIDLEVLQTLSVNTTLEELKIRKLRKELTNAKEMKMWEAKIAQLRWE
LMMKTKEHTKKLHQMNDLCIEKKQLDSRLNTLQNQQGNAFQGPRKADIVAREKITELVQA
QAQRIVDLKEEIALLRKKGGLILPPIQPTQENEMSPMNL
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaccagatgatcaggatactgaaggggggaaatcagatagatcaaaaagcagt
ggaaaacagtctcttaaatcagaatcaagatatggttttgaagataccacagatgataca
ttcactgaaggggaagaatcatatttagaggaagactcagatttggaagacttggaagga
agttcaagttcacttccatatgattatgtggaaagcaaaaaagcatctcaggaaccccct
ggcctagatgcagaagaggcagaggaagaacttaagaagaaaatatcagagagcttcttt
tatgattacatggaacttgcttcaatgccttttgtgactccagattcgaacataccactg
gattttcttgtacttatacattcttttggttatgactgcagaaagcgagccaacctacag
cttctagacagcagtaccctgatgtacatcgctgggaaccaactgattcttctgaatttt
aaaaccaaagaacagacctacctgagaagtagcagtggtcaagggattggtgtcattggg
gttcatccatataaaacttacttcacagtagctgaaaaaggaagttttccaaatattatc
atctatgaatatccttctctgaagccctacagaatccttcgagatggaactgagaaggca
tatgcctatgtggactttaactacaatggtaccttgttggcctctgttggtagttcccct
gattacacgctaactatttggaattggaaagacgagcaacccatactgaggaaaaaagct
ttttctcaggatgtttttaaggttactttcaatcctgaagatgatgagcagcttactaca
gcaggatcaggccacatcaagttttgggaaatggcttatacattcactgggctcaagttg
cagggatcgctaggtcgatttgggaaaacaaccactactgatattgaaggctacatcgag
ctcccagatgggaaggtgctctcaggtacagaatggggcaacctgctgctttgggaaggc
agcctcatcaaagtggagctctgtcgaactggaatgaagtcttgtcaccatggttccatt
aaccagataatgctggatgagggagaagttattactgctgggtcagatgggtgtattagg
atatgggacttcgagacaatcgacactgctgatattatagatgatactggattactggag
attgagcctattaatgaacttcaagtagataagaatgtcaatctcttttctctgataaaa
ataaatacacctggatataacttgtggttggctcaggattccaatggagccatatggaag
cttgaccttagtttttccaatattacccatgatccagaatgcctcttctccttccactct
gaagctattgaagccgtggctacttcccctctcacttacctcatggccacgactgccttg
gactgttctgttcgaatctatgattttgctagcaaaaattctttggctcagatgaaattc
aaacaaggaggtactgccctcacctgggtaccccgaatagtaagctactctggagcacaa
attgctgtaggatttgaagatggggttgttcgaattcttgaactttatgatccaaaaggg
ctcacaatttttgcaggacggaaaaaagttccagatgtcgatatttatttgagacaggtt
ttcaaaccccatactgctcaagtcactgctttagcttatgaacgtgatgcagaagttcta
gccacagggagtaaagatcacaccgtctttttctttgaagtggaaaaggattataaacca
attggttttatcaacacccctggacctgtttgccagctaatatggtcttcagtcttacat
cctgacagtactttactgattctctgtgagaatggctatgttcttgaagctccatgtcca
accatcaaggaagaagaggacgatcatgatgtagtttcctatgaaatcagtgatatgtgc
ttaaaatgtttccatttcacaagtgtcaaatctaagattctgagatcaatagaaattgaa
aagagagaaaagcaaaaggagttgaaggcacaggaaagggaagcaaggaggaagaagcta
atagaagagatgggagaagatgcagaaaaagaattacaggaagaggaggaagaagaggaa
gaggagccattgcctgaactctttatcccaccaaacccctctcccatcctctgtggcttc
tactctgagccagggaagttctgggtttccttgggtgactatgattctggttttctatat
cactgtgaatttccctcatgtgacaaaagaagcaatttcgaagaacagaaagatgaacct
tttgattttcgttttcttgagaatacagaagacaatcccatccaaactattactttcagc
tttagccaaactatgatgttttgtggcatgagaaatggagcagttagagtgtatatccga
agtcatgatgatcattcactaaccaatttggactactactggcactttaatatgcatgac
aatgattatgggtatgttaaaagcatggcgactagctttgatgaccggttcttgatcacg
gctggagcagataataatatctttgttttcaatgtttattctgaacttgaattcctgaaa
atcatcaaagccaaagtgccatctcccaagtttggaattgaaacagagccatccccagaa
gatattgaagatcccaaagcctacagtattgagaatgctaggagaaaaagagaacatgac
aagttaatgaaagaaatggaagaattaaaagctggaaagagagaacaaatccgtgctttg
aggaatgaattttggaaactattagaaatgaacaaagaattaccanagcatatgcaattt
aaaagaacagactttgatcttgattccaaaattcgtgctgatattgatagaaaaactgtt
tataaaattcaccaagtagaaaaggaattagcttgggaaaaagagaaacatgagctcggc
ttaatgaagctacagaatagatttcgtgatccactggaaaatgacactattgtggtttat
gctatacaaactgaccacaagatatcctcctataggctggtaaagccctctaaatattcc
aaatataaacgaacaagtcagtcagagagaaaaccaagtaaattggagaggtttgaaaaa
gagggatctggaaaaagggatagccagaaagatacaggtgaaagtattatcatacaagaa
gaaacaatgatagaaaaagggaaaatatttcggcctagaaccctaagtgaaattatgata
gacaatcaaattgagaaaacaaggaaacttatacaaaaagcggaaagagcccaactaaag
atccagcagcggaaaaaagaatgggaggaactatataagagtaaacctgatgaagactat
gaagatcccaaagatgttcaagccattaaagaagcccaagtgtatatgggagatttcaat
ctgaagacagccccagactacaagatacctgaacacatgagaataaatgctgccaaaaag
gaagaggaattgggacaccttgtttctttggtccatgggaaaaaaatgcatatgaacaag
tgtatcctctctcttcgagatcttaaagtggctgttattgaggaaatacagtgcctggta
caagaactgaagagcattcaatcgaccctccacatatccaagcacatcccaattccccaa
gtcccccagatacacccagaagaagttccagaaaagagatttcactatgatgaggagatt
ctcaaaaagtttaagcgacagcggatgaaaattgaggtgcaaaagcgcagccatatggat
cagatagtgtctaccaacgcaggcagagggttcctcaaactcccttctggaaaggatgga
gatgtgacaacacgggactcactgtctaggtcatccagggcatcgacattcagcctggaa
cttccaaagccacctgagtttgaaaaaacagagcctactgaggtggagctggagatcatg
aagagggacgagattaaacacttgtacacacaagagtacttgaccaacaggatcaaagaa
ctgactgtcacttttgatgcagaacttcgtctcctgagacatcagaaactgaaattagac
actcagatgaaattatctgacctacaccatgtcacattatttcaagaaattcttcttctc
aagaattttgaaaaacaggagaacatacttcaagaacgtgttaattcatgtgacaaagag
gaacaggatatgcagtggaaaataaatgaacttcttaaagaaatggaagagcgaaaaaat
gaaatcaccaagctacaagaacaagaaaaggcactctatgctggtttccaggcggccctt
ggagaaaacaataaatttgctaacttcctcctgaaggtcctaaagaagaagattaagcgg
gtaaagaaaaaggaggttgaaggagatgctgatgaagatgaggagagtgaggaatcaagt
gaagatgaatccagcttggagagtgatgaggaggagtctggctctgaagatgagngtttt
gatgattctatctgcccaacaaattgcgataaggctcttttcgaacttgcccttcaactt
cgagaaaaaaggctggacattgaggaggctttagttgaagaaaagaaaactgttgataac
ctcaaaaaggaatatgatacattgtccaaaaaagtaaaaattgtggcaacgaatctgaat
gcggcagaggaggccctggaggcttatcagcgagagaagcagcagcagctgaacgaactg
ctggttgtgtttccactcaagctccaccaggtagaatatatgcaatctggggaaataccc
catgatctttcgggtactctggtcttctctaacctctccttgggacggctacaagcacga
atcatacagctccatgaagagaacatcaagcagcaaaaactgaacaaagaatgccgggag
aggcgaaagcggctcatccgagaaaagagacagatggcaaaaaccatacgtaaaatggaa
gaaaccgttcgtcaactaatgattgacaagtttggccgggtgatagatctagaagtcctt
cagacgctttctgttaatacaacacttgaggaactaaagatcagaaagcttcgaaaagag
ctgacgaatgcaaaggaaatgaagatgtgggaggcaaagattgctcagctgcgatgggaa
ctgatgatgaagactaaagaacacacaaaaaagcttcatcagatgaacgacttgtgcatt
gaaaagaagcagcttgattctcggctgaatacactacagaaccagcagggcaatgccttc
cagggtcctcggaaagcagatattgtagcaagagagaagatcactgaattggtccaagcc
caggcacaaaggattgtagacttaaaggaagagattgctcttttgcgcaagaaaggaggc
cttatcctcccacccattcagcccacacaagagaatgaaatgagccccatgaacctttag
DBGET
integrated database retrieval system
