Sciurus carolinensis (gray squirrel): 124992403
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Entry
124992403 CDS
T08117
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124992403
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124992403
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
GHL5
Motif
Other DBs
NCBI-GeneID:
124992403
NCBI-ProteinID:
XP_047419092
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All DBs
Position
9:complement(71652933..71672425)
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AA seq
710 aa
AA seq
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MGRVHRPPPGPHRHCEGCINRHCHVPVEPNVSCLVINCHLLCGATFHMCKEAEHKLLCPL
EQVPCLNSEYGCPLLMSRHKLAKHLQACPASVVCCSMEWNRWPNVDSETVLHENIMKETP
SEECLDTALALQDQKILFRSLNMVELFPETRDATEEEPTKNGDASWEEMGGAVGGADASL
VPHNCLSAANGEMKELSQEEREALAKTKEGMDLANFSKWENMFSKEHTASALTSSSANCE
SKSGEGAGTEQSSSGNDMVDGEAAAKGKEPQQDQKQQNFPAVMEKTGLAPWQDGVLERLK
TAVDAKDYNMYLVHNGRMLIHFGQMPACTPKERDFVYGNLEAQEVKTVYTFKVPVSYCGK
RARIGDAMLSCRPSEHKAVDTSDLGITVEDLPKSDLIKTTLQCALERELKGHVISESRSI
DGLFMDFATQTYNFEPGPFSSGTVLADLLTTANPEGLHVELHSECVTRRHNKSSSAFTFT
CNKFFRRDEFPLHFKNVHTDIQSCLNGWFQHRCPLAYLGCTFVQNHFRPPGQKSKVIYSQ
KLKTFAIKPEVAPELNESRKNNHLVSHEGKSQNSLTSLPLEILQYIAGFLDSISLSQLSQ
VSVLMRNICATLLQERGMVLLQWKKKKYSHGGTSWKVHREIWQFSSLFSQIKSWEFNEVT
SMSEHLKACPFNIREHKTDPIRLTSMCQPREQAQESLVSTFRTRPRGRHT
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggtacacaggcccccacctgggccacacaggcattgtgagggatgtatcaac
cgccactgccacgttcctgtggagcccaacgtctcctgcctggtgataaactgccacctg
ctctgtggtgctaccttccacatgtgcaaagaggcagagcacaagctcctctgtccctta
gagcaggttccatgcctcaactctgaatatggctgcccccttttaatgtcccgccacaag
ctggccaagcacctgcaggcatgccctgccagcgtggtctgctgctccatggaatggaac
cgctggccaaatgtggactcagaaacagtccttcatgagaatatcatgaaagagaccccc
agtgaggagtgtttggacacagccctggccctccaggatcagaagattctcttcagatcc
ttgaacatggtagagcttttcccagaaactagagatgccacggaggaggagccaactaag
aatggtgacgccagctgggaggaaatgggaggcgcagtgggaggagcggatgccagtttg
gtaccacacaactgtttgtcagcagctaacggggagatgaaagagttgagtcaagaagaa
cgagaggcattagccaaaaccaaagaagggatggacctggccaacttcagcaagtgggaa
aacatgttcagcaaagaacacacagcctctgctttaacaagttcatcagcaaattgtgag
agcaagagcggggagggtgcagggacagaacagagttccagtggcaatgacatggtagat
ggagaggctgctgccaaaggcaaagaaccacagcaagaccagaagcagcagaactttcct
gcagtaatggaaaagacagggcttgctccctggcaggatggtgttctggaaagactgaaa
accgctgtggatgcaaaggactataatatgtacctagtgcacaatgggcggatgctcatt
cactttggtcagatgcctgcttgcacacccaaggagagagactttgtttatggcaacctt
gaggctcaagaagttaagaccgtttacaccttcaaagttcctgtgagctactgtgggaag
cgggcacgaattggggatgccatgttgagttgcaggccaagtgaacacaaggccgtagat
acttccgatttgggaatcactgtggaggacctgccaaaatcagatctcattaaaaccacc
ctccagtgtgctttggaaagagaactcaagggtcacgtcatctctgaatccaggagcatt
gatgggctgttcatggattttgccacacaaacgtacaactttgagccaggaccattttcc
tcagggacagtgctggctgatctcctgactactgcgaacccagagggacttcatgtggag
ctccacagtgagtgtgtgaccaggagacacaacaagagtagctcagcctttactttcacc
tgcaacaaattcttcaggagggatgaattccccctgcactttaagaatgtccacacagac
attcagtcatgtctcaatggctggttccagcatcgatgcccccttgcctacctgggctgt
acgtttgttcaaaaccatttccgtcccccaggacaaaagtccaaagtgatctacagtcag
aagctcaagacctttgccatcaagccagaggttgctccagagctgaatgagagcaggaaa
aacaaccatcttgtaagccatgaaggaaaaagccagaattctctaaccagtctgcccctg
gaaattttgcagtacattgctgggttcttggacagcatcagcctgtcccagctctcccag
gtatctgtgctgatgaggaatatctgtgccacgctcttacaagagagagggatggtcctc
ttacaatggaagaagaagaaatattcccatggaggcacctcctggaaagtccacagagag
atctggcagttcagcagcctcttctcccaaatcaagagctgggaatttaatgaagtcacc
tccatgtccgagcacctaaaggcctgtcctttcaacattagagagcacaagactgacccg
attcgtttgaccagcatgtgtcagccccgcgagcaggcccaagagagcttagtctccacc
tttagaactagaccacgtggaagacacacctag
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