Sciurus carolinensis (gray squirrel): 124992454
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Entry
124992454 CDS
T08117
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124992454
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124992454
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124992454
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124992454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
TAN
Motif
Other DBs
NCBI-GeneID:
124992454
NCBI-ProteinID:
XP_047419172
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All DBs
Position
9:139206681..139236643
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AA seq
720 aa
AA seq
DB search
MAPAMQPAEVQFAQRLASSEKGVRDRAVRKLRQYLSVKTQSETGGFSQEELLKIWKGLFY
CMWVQDEPLLQEELANTISQLIHVVNSSEAQHLFIQTFWQTINREWKGIDKLRLDKYYML
IRLVLRQSFEVLKRSGWEESQIKVFLDVLMKEILCPESRSPDGVKFHFIDIYLDELSKVG
GKELLADQNLKFIDPFCKIAAKTKDHTLVQTIARGVFEVIVDQSPLIPEDTVEEQKTKVG
DGDLSEEEAFENEAAWKKAVGRKKTALSKCHSRRERASDERGRKDCGTLEDTGLLLQFDY
KAVADRLLEITNKKNIPPFNRKRLCKLIKKFQGLSEGGIPRLSFPEDISAEEDDQALCQR
KHKKKRRNKVFLAEEEDSEGSIQKRKRKKKKRSHPQSETWGLRDAATPPAQSGGGEPAPA
QRQTPQERAAEPRAEAESSTREKSSSERPPSVPTHSRRKRLKRKSLGAQGEIWDPTELPL
EDRARSGPGSGHPQGPATRGSPTDGAQVLKRKRKLGALPVNGSGQASLTQCRRPQKKKAE
PSSLDLYNLSSQKTTILKKRKKMKEMSNLIEHNGILGSRVRQIQALGTSISPLKKQPLRT
EKDFVKFDTLFLPKPLFFRRAKSSAATRPAERAIQLNRTPSSTKKVTFGLNRNTTAEFKK
TDKSILVSPTGPSRVAFNPEQKPLHGVLKTPTSSPASTPLATKKPLATAPKRRPTAMDFF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgccatgcagcctgccgaggtccagtttgctcagcgactggcgtccagcgag
aagggcgtccgcgaccgcgcggtgaggaagctgcgccagtacctcagcgtgaagacgcag
agcgagacaggaggtttcagccaagaagaactcctaaaaatatggaaaggactcttctac
tgcatgtgggtgcaggatgaaccccttctgcaggaggagctagcgaacactatttcccaa
ctcatccatgttgttaacagctcagaggctcaacacctgttcattcagaccttctggcaa
accataaatcgagaatggaagggaatagacaagctgcgcctggacaaatactacatgctg
attcgcctggtcctgagacagtcttttgaagttctgaaacggagtggctgggaggaaagc
caaatcaaggtttttctagatgttctgatgaaggagatcttgtgtcctgagagccggtct
cctgatggagtgaaattccatttcatcgatatttatctggacgaactatccaaagtggga
gggaaagagcttttggcggatcagaacctcaagtttattgacccattctgcaaaattgct
gccaagaccaaggaccacacactggtacagactatagctaggggtgtttttgaagtcatt
gtagatcagtctcctctcatacctgaagacacagtggaggagcagaaaaccaaagtgggt
gatggtgacctctctgaagaggaggcgtttgaaaacgaggcagcttggaaaaaggcagtc
ggcagaaagaagacagcattgagcaaatgccactccaggagagagagagccagcgatgaa
agaggaagaaaggactgtggcactttggaagacacagggcttcttctccagtttgactat
aaggctgttgcggaccgactcttggaaataaccaacaagaaaaacatccctcccttcaac
cggaagcgtctctgcaaactaatcaaaaagttccaaggcctctctgaaggtgggatccct
cgactcagttttcctgaggacatttctgctgaggaagatgatcaagccctctgtcaaaga
aaacataagaaaaaaagacgaaacaaagtctttcttgctgaggaagaggacagtgaaggc
agcattcagaaaagaaaaaggaaaaaaaagaagaggagccacccccagtctgagacttgg
ggcctgagggacgcagccacacccccagcacagagcgggggaggggagcctgcacctgca
cagaggcagaccccacaggagcgagcagctgaacccagagcagaggccgagtccagcacc
agggagaagagcagctcggagcgtcccccctctgtccccacgcacagtaggaggaagcgg
ctgaagagaaagagcctgggggcacagggagagatctgggaccccacagagctgcctctg
gaggacagggctcgaagtggccctggcagcggccatccccagggacctgccacccgaggt
tccccaacagatggagcccaggtcctgaaaaggaagaggaagcttggagcactccctgtc
aacggcagcggccaggcctctctgacccagtgcaggaggccccagaaaaagaaggcagag
cccagcagccttgacctctataatctgtccagtcagaaaacaacgattttgaagaagagg
aagaagatgaaagaaatgtctaacttgatagaacacaacggaatactgggatccagagtc
aggcagatccaagctctgggaaccagcatttcccctttgaagaagcagccactgaggaca
gaaaaggacttcgtgaagtttgacaccctcttcttaccaaaacccctgttcttcagaaga
gccaagagcagtgctgccacccgccctgcagagcgagccatccagctgaacagaacaccc
agcagcaccaaaaaagtcacctttgggttgaacagaaacaccactgcagagttcaagaag
acggacaagagtatcctggtcagccccacaggcccctcccgagtggccttcaaccctgag
cagaagcccctccatggagtgctgaagacccccaccagctctcctgccagcactcccctg
gcaaccaagaagccactggccacagctccaaagagaaggccaacagctatggacttcttc
tga
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