Sciurus carolinensis (gray squirrel): 124992488
Help
Entry
124992488 CDS
T08117
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04530
Tight junction
ncar04659
Th17 cell differentiation
ncar05200
Pathways in cancer
ncar05202
Transcriptional misregulation in cancer
ncar05220
Chronic myeloid leukemia
ncar05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124992488
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
124992488
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124992488
05202 Transcriptional misregulation in cancer
124992488
09162 Cancer: specific types
05221 Acute myeloid leukemia
124992488
05220 Chronic myeloid leukemia
124992488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124992488
Transcription factors [BR:
ncar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
124992488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
124992488
NCBI-ProteinID:
XP_047419227
LinkDB
All DBs
Position
9:complement(132041468..132272293)
Genome browser
AA seq
480 aa
AA seq
DB search
MASDSIFESFPSYPQCFMRECIHGMNPSRDIHDASTSRRFTPPSTALSPGKMSEALPLGA
PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP
HHPAPTPTPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYDQSYQYLGSIASPSVHPAT
PISPGRASGMTSLSAELSSRLSTAPDLTAFGDPRQFPALPSISDPRMHYPGAFTYSPTPV
TSGIGIGMSAMGSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG
GERSPPRILPPCTNASTGSALLNPSLPNQSEVVEAEGSHSNSPTNMAPAARLEEAVWRPY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagacagcatatttgagtcatttccttcgtacccacagtgcttcatgagagaa
tgcatacatggaatgaatccttctagagatattcacgatgccagcacgagccgccgcttc
acgccgccttccaccgcgctgagcccaggcaagatgagcgaggcgctgccgctgggcgcc
ccggacgccggcgccgccctggccggcaagctgaggagcggcgaccgcagcatggtggag
gtgctagccgaccacccgggcgagctggtgcgcaccgacagccccaacttcctctgttct
gtgctgcccacgcactggcgctgcaacaagacgctgcccatcgctttcaaggtggtggct
ctgggggatgttccagatggcaccctggtcactgtgatggctggcaatgatgaaaactac
tcggctgagcttagaaatgcaaccgcagccatgaagaaccaagtcgcaagattcaatgac
ctcaggtttgtcggtcggagtggaagagggaagagcttcactctgaccatcaccgtgttc
acaaacccaccgcaagtagccacctaccacagagccatcaaaatcacagtggacggaccc
cgggaaccccgaagacatcgtcagaaactagatgatcagaccaagcccgggagcttgtcc
ttttctgagcggctcagtgaactggagcagctgcggcgcacggccatgagggtcagcccg
caccacccagcccccacgcccacccctcgggcctccttgaaccactccactgcctttaac
cctcagcctcagagccagatgcaggatacaaggcagattcagccgtccccaccgtggtcc
tacgaccagtcctaccagtacctgggatcgattgcctctccttctgtacacccagcaacg
cctatttcgcctggacgtgccagtggcatgacaagtctctctgcagaactttccagtcga
ctctcaacggccccggacttgacggccttcggcgacccgcgccagttccccgcgcttccc
tccatctcagaccctcgcatgcactaccccggcgccttcacctactccccgacgcccgtc
acgtcgggcatcggcatcggcatgtcggccatgggctcggccacgcgctaccacacgtac
ctgccgccgccctaccccggctcgtcgcaggcgcagggcggcccgttccaggccagctcg
ccgtcctaccacctgtactacggcgcctcggccggctcctaccagttctccatggtgggc
ggcgagcgctcgccgccgcgcatcctgccaccctgcaccaacgcctccacgggctcggcg
ctgctcaaccccagcctcccgaaccagagcgaggtggtggaggccgagggcagccacagc
aactcgcccaccaacatggccccggccgcgcgcctggaggaggccgtgtggcggccctac
tga
DBGET
integrated database retrieval system
