Sciurus carolinensis (gray squirrel): 124992490
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Entry
124992490 CDS
T08117
Name
(RefSeq) double-stranded RNA-specific editase 1 isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124992490
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124992490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
124992490
NCBI-ProteinID:
XP_047419231
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All DBs
Position
9:140239004..140360799
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AA seq
698 aa
AA seq
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MDVEDEENMSSSSADIKENLDNVSPKDGSAPGPGEGMQLPSGGSSGTGRKRPLEEGSNGH
SRYRLKKRRKTPGPVLPKNALMQLNEIKPGLQYTLLSQTGPVHAPLFVMSVEVNGQVFEG
SGPTKKKAKLHAAEKALRSFVQFPNASEAHLAMGRTLSVHTDFTSDQADFPDTLFNGFET
PDRAEPFCMGSNGDESLSSSGDLSLSASPVPASLAQPPLPGPPPFPPPSGKNPVMILNEL
RPGLKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAAQSALATVFNLHLDQ
TPSRQPVPSEGLQLHLPQVLADAVSRLVLGKFSDLTDNFSSPHARRKVLAGVVMTTGTDV
KDAKVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYAQLELYLNGKDEQKS
SIFQKSERGGFRLKEAVQFHLYISTSPCGDARIFSPHEPVLEEPADRHPNRKARGQLRTK
IESGEGTIPVRSNASIQTWDGVLQGERLLTMSCSDKIARWNVVGVQGSLLSIFVEPIYFS
SIILGSLYHGDHLSRAMYQRISNIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWT
VGDPAIEVINATTGKDELGRASRLCKHALYCRWMRVHGKAPPHLLRTKITKPTTYHESKL
AAKEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSLTP
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagaagatgaagagaacatgagttccagcagcgcagacatcaaggagaacctg
gacaacgtgtcccccaaggacggcagcgcccctgggcctggtgagggcatgcagctcccc
agtgggggcagcagtggcactggccggaagcggcccctggaggagggcagcaatggccac
tccaggtaccgcctgaagaagcggaggaaaaccccagggcccgtgctgcccaagaacgcg
ctgatgcagctgaacgagatcaagcccgggctgcagtacacgctgctgtcccagacgggg
cccgtgcacgcaccgctgttcgtcatgtccgtggaggtgaacgggcaggtcttcgagggc
tctggccccaccaagaagaaggcgaagctccacgctgccgagaaggccctgaggtccttc
gtgcagtttcccaacgcctccgaggcccacctggccatgggcaggaccctgtccgtgcac
acggacttcacgtccgaccaggccgacttccccgacacgctcttcaacggcttcgagacc
ccggacagggcggagcccttctgcatgggctccaacggagacgagtccctgagctccagt
ggggacctcagcctctcggcctcgcccgtgcccgccagcctcgcccagcccccgctcccg
ggcccgccgcctttcccgccacccagcgggaagaacccggtgatgatcctgaatgagctg
cgcccggggctgaagtacgacttcctgtcggagagcggggagagccacgccaagagcttc
gtcatgtccgtggtggtggacggccagttcttcgagggctcgggcaggaacaagaagctg
gccaaggcccgggctgcacagtcggccctggccactgtcttcaacctgcacctggaccag
acgccgtctcgccagcctgtgcccagcgaggggctgcagctgcacctgccccaggtgctg
gcagatgccgtctcgcgcctggtcctgggtaagttcagtgacctgacggacaacttctcc
tcgcctcacgcacgcaggaaagtgctggccggagtcgtcatgaccacaggcacagacgtc
aaggacgccaaggtgatcagcgtgtccacggggaccaagtgcatcaacggggagtacatg
agcgaccgcggcctggccctgaacgactgccacgcggagatcatttcccggcggtccttg
ctcaggtttctctacgcgcagctggagctctacctgaatggcaaggacgagcagaagagc
tccatcttccagaagtcggagcgagggggcttccggctgaaggaggccgtgcagttccac
ctgtacatcagcacctctccctgcggggacgcccggatattctcgccccacgagccggtg
ctcgaagaaccagcagatagacatccaaaccgcaaagcgaggggacagctgcggacaaaa
attgagtctggtgaggggaccatccccgtgcggtcgaacgccagcatccagacgtgggac
ggggtgctccagggagagaggctgctgaccatgtcctgcagcgacaagattgcacgctgg
aacgtggtgggcgtccaaggctccctgctcagcatcttcgtggagcccatctacttctcc
agcatcatcctgggcagcctctaccacggcgaccacctctccagggccatgtaccagcgg
atctccaacatcgaggacctgccgcccctctacaccctcaacaagcccctgctcagcggc
atcagcaacgcagaggcgcgacagccagggaaggcgcccaacttcagcgtcaactggacg
gtaggcgaccccgccatcgaggtcatcaacgccacgacagggaaggacgagctgggccgc
gcctcgcgcctgtgtaagcacgcgttgtactgtcgctggatgcgtgtgcacggcaaggca
cccccacacttgctgcgcaccaagatcactaagcccaccacctaccacgagtccaagctg
gcggcaaaggagtaccaggctgccaaggcgcgtctcttcaccgccttcatcaaggcgggg
ctgggcgcctgggtggagaagcccacggagcaggaccagttctccctcacgccctga
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