Sciurus carolinensis (gray squirrel): 124992492
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Entry
124992492 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124992492
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124992492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Gcd10p
INTS5_C
Motif
Other DBs
NCBI-GeneID:
124992492
NCBI-ProteinID:
XP_047419244
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Position
9:complement(140293717..140295020)
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AA seq
399 aa
AA seq
DB search
MEGSGEHPSPQAPYPGDNRILDGDFVVLKREDVFKAVQVQRKKXTKEAGTDNRNIIDDGK
SQKLTQDDIKALKDKGIKGEEIVQQLTENSTTFRDKTESAQDKYIKKKKKKYEAIITILK
PSTHILSIMYYAREPGKINHMRYDTLAQMLTLGNIRAGNKMIVMETCSGLVLGAMMERMG
EPKDSASVEESNGALEEKQNSKPDNEDSMAEAPESNNPEQESTEVVPQDPEYKGPKERGS
KKDYIQEKQRRQEEQRKRHLDAAALLSERNADGLIVASRFHPTPLLLSLLDFVAPSRPFV
VYCQYKEPLLECYTKLRERGGVINLRLSETWLRNYQVLPDRSHPKLLMSGGGGYLLSGFT
VVLDNLRADTSLKSSASTLESHKTGEPAAKRQKCPESGS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcaggagaacatccgagcccacaggccccgtatcccggggataaccgcatc
ctcgacggcgactttgtggtgctgaaacgggaagatgtgttcaaagcagtgcaggtccag
cggaaaaaanngaccaaagaagctggcactgataatcgaaatataattgatgatggaaaa
tctcagaaacttactcaagatgacataaaagctttgaaagacaagggcattaaaggagag
gaaatagttcagcagttaactgaaaatagtacaacatttcgagacaagacagaatctgct
caagataaatatattaaaaagaagaaaaagaaatatgaagccatcataactattttgaag
ccatctacccatattctttcaattatgtattatgcaagagaacctggaaaaattaaccac
atgagatatgatacactagcccagatgctgaccttgggaaatatccgtgctggcaataaa
atgattgtaatggaaacatgttcaggcttggtgctgggtgcaatgatggaacgaatggga
gagccaaaagacagtgcatcagttgaagaaagtaatggcgcacttgaggaaaagcagaat
tctaagccagacaatgaagacagcatggccgaggccccagagagcaataacccagaacaa
gaatcgacggaggttgttcctcaagatccagaatataaggggcctaaagaaagaggaagc
aaaaaagattatattcaggaaaagcaaagaagacaagaagagcagaggaaaagacacttg
gatgctgctgctctgctgagtgaaaggaacgcagatggtttaattgtggccagtcgtttc
catcccactccattgctgctgtctttgctggactttgtggccccttcaaggcctttcgtg
gtctactgtcagtataaagagcctttgttggaatgctacacaaaactgcgtgagagggga
ggggtcatcaacctcaggttgtctgaaacctggctcagaaattatcaggttttgccagat
agaagtcatcccaagctgctgatgagtggaggtggaggttaccttctgtcaggcttcact
gttgtcttggacaaccttcgagcagacaccagcctcaagtccagcgcaagcaccttagaa
tcacacaagactggggagccagcagctaaaagacagaaatgcccagagtctggctcataa
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