Sciurus carolinensis (gray squirrel): 124992586
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Entry
124992586 CDS
T08117
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ncar01100
Metabolic pathways
Module
ncar_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
ncar_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
124992586
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncar01003
]
124992586
Enzymes [BR:
ncar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
124992586
Glycosyltransferases [BR:
ncar01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
124992586
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
B3GALT2_N
Motif
Other DBs
NCBI-GeneID:
124992586
NCBI-ProteinID:
XP_047419499
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All DBs
Position
9:53552413..53570805
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AA seq
377 aa
AA seq
DB search
MRMFVSGRRVKKCQFIQLFATCFILSLMFFWGPIDNHIVSHMKSYSYRYLINSYDFVNDT
LSLKHSSERARYPYLINHKEKCQAQEVLLLLFIKTAPENYHRRSAIRRTWGSEEYVRSQL
NANIKTLFALGTPNPLKGEELQKKLVWEDQIYNDIIQQDFVDSFYNLTLKLLLQFSWANT
FCPHAKFLMTADDDIFIHMPNLIEYLQSLEQIGVQDFWIGRVHRGAPPIRDKSSKYYVSY
EMYQWPAYPDYTAGAAYIISSDVAAKVYEASQTLNSSLYIDDVFMGLCANKMGIVPQYHV
FFSGEGKAPYHPCIYEKMMTSHGHVQDLQDLWKDATDPRVKTASKGLLGQIYCRLIKIFL
LCKLTYTDTYPCRAAFV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgtttgttagtggcagaagagtaaaaaaatgtcagtttattcagttatttgcc
acttgttttatactaagcctcatgtttttttggggaccgattgataatcacatcgtgagc
catatgaagtcctactcttacagatacctcataaatagctatgactttgtgaacgatacc
ctgtctcttaagcacagttcagagagggctcgctacccatacttgattaaccataaggag
aagtgtcaagctcaagaggtcctcctcttactgtttataaagactgctcctgaaaactac
catcgccgatctgcaattagaagaacatggggcagtgaggagtatgttcgatctcaactt
aatgccaacatcaaaactctgtttgccttaggaactcctaatcccctgaagggagaagaa
ctacaaaaaaaactggtttgggaagatcaaatatacaatgacataattcagcaagacttt
gtcgattctttctacaatcttactcttaaattacttctgcagttcagttgggcaaatacc
ttttgtccacatgcaaaattcctgatgactgctgatgacgacatatttattcacatgcca
aatctcattgaataccttcaaagtttagaacaaattggtgtccaagacttttggattggc
cgtgttcatcgtggtgcccctcccattagagataaaagcagcaaatactacgtctcttat
gaaatgtaccagtggccggcttaccctgactatactgctggtgctgcctacatcatctcc
agtgatgtcgctgccaaggtctatgaggcatcacagacactgaactctagtctctacata
gacgatgtgttcatgggtctctgcgccaataaaatggggatagtaccacagtaccatgtg
tttttttctggggaagggaaagctccttatcatccctgcatctatgaaaaaatgatgaca
tctcatggacacgtacaagatcttcaggacctttggaaggatgctaccgatcctagagta
aaaactgcttcaaaagggcttttgggtcaaatatactgcaggttaattaagattttcctc
ctttgcaaattgacctatacggacacgtatccttgtagggctgcttttgtctaa
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