Sciurus carolinensis (gray squirrel): 124992594
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Entry
124992594 CDS
T08117
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1 isoform X1
KO
K03260
translation initiation factor 4G
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09166 Cardiovascular disease
05416 Viral myocarditis
124992594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124992594
03012 Translation factors [BR:
ncar03012
]
124992594
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124992594
mRNA cycle factors
Stress granule specific factors
124992594
Translation factors [BR:
ncar03012
]
Eukaryotic type
Initiation factors
eIF-4
124992594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
124992594
NCBI-ProteinID:
XP_047419519
LinkDB
All DBs
Position
9:54496497..54514900
Genome browser
AA seq
1610 aa
AA seq
DB search
MNKAPQPTGPPPTPSPGLPQPAFPPGQTAPVVFSTPQATQMNTPSQPRQGGFRSLQHFYP
SRAQPPSSAASRVQSAAPARPGPAAHVYPAGSQVMMIPSQISYSASQGAYYIPGQGRSTY
VVPTQQYPVQPGAPGFYPGASPTEFGTYAGAYYPAQGVQQFPAGVAPAPVLMNQPPQIAP
KRERKTIRIRDPNQGGKDITEEIMSGARTASTPTPPQTAGGGQEPQANGETPQVAVIVRP
DDRSQGAIIGGRSGLPGPEHSPSESQPSSPSPTPSPPPILEPGSEPNLGVLSIPGDTMTT
GMIQMSVEESTPISRETGEPYCLSPEPTPLAEPILEVEVTLSKPVPESEFSSSPLQVPTP
LASHKVEIHEPNGMVPSEDLEPEVESSPELVPPPLPACPSESPVLVAPTAQPEELLNGAP
SPPAVDLSPVSEPEEQAKEVTTSVASPTILSATPASAPPAISSAQEEEMEEEEEEEEEEA
VEAENEKGGEELLPPESAPVPAHLSQNLEVAAATQVAVSVPKRRRKIKELNKKEAVGDLL
DAFKEVNPAVPEVENQPPIGNNPGPESEGSSVPPRPEETDETWDSKEDKIHNAENIQPGE
QKYEYKSDQWKPLNLEEKKRYDREFLLGFQFIFASMQKPEGLPHITDVVLDKANKTPLRP
LDPSRLPGINCGPDFTPSFANLGRPALSNRGPPRGGPGGELPRGPQAGLGPRRSQQGPRK
EPRKIIATVLMTEDIKLNKAEKAWKPSSKRTAADKDRGEEDADGSKTQDLFRRVRSILNK
LTPQMFQQLMKQVTQLAIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLMALKVPTT
EKPTVTVNFRKLLLNRCQKEFEKDKDDDEVFEKKQKEMDEAATAEERGRLKEELEEARDI
ARRRSLGNIKFIGELFKLKMLTEAIMHDCVVKLLKNHDEESLECLCRLLTTIGKDLDFAK
AKPRMDQYFNQMEKIIKEKKTSSRIRFMLQDVLDLRQSNWVPRRGDQGPKTIDQIHKEAE
MEEHREHIKVQQLMAKGSDKRRGGPPGPPISRGLPLVDDGGWNTVPISKGSRPIDTSRLT
KITKPGSIDSNNQLFAPGGRLSWGKGSSGGSGAKPSDAASETARPATSTLNRFSALQQAV
PTESTDNRRVVQRSSLSRERGEKTGDRGDRLERSERGGERGDRLDRARTPATKRSFSKEV
EERSRERPSQPEGLRKAASLTEDRDRGRDAVKREATLPPVSPPKASLSEEELEKKSKAII
EEYLHLNDMKEAVQCVQELASPSLLFIFVRHGIESTLERSTIAREHMGRLLHQLLCAGHL
STAQYYQGLYEILELAEDMEIDIPHVWLYLAELVTPILQEGGIPMGELFREITKPLRPLG
KAASLLLEILGLLCKSMGPKKVGMLWREAGLSWKEFLPEGQDVGAFVTEQKVEYTLGEEP
EGPGQRALPFEELSRQLEKLLKEGSSNQRVFDWIDANLSEQQIASNTLVRALMTTVCYSA
IIFETPLRVDVAVLKARARLLQKYLCDEQKELQALYALQALVVTLEQPANLLRMFFDALY
DEDVVKEDAFYSWESSKDPAEQQGKGVALKSVTAFFNWLREAEEEESDHN
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagctccacagcccacaggccccccgcccaccccatcccctggactcccacag
ccagcgtttcccccggggcagacagcaccggtggtgttcagtacgccacaagcgacacaa
atgaacacgccttctcagccccgccagggaggattcaggtctctgcagcacttctaccct
agccgggcccagcccccaagcagtgcagcctcccgagtgcagagtgcagcccccgcccgc
cctggcccagctgcccatgtctaccctgctggatcccaagtaatgatgatcccttcccag
atctcctactcagcctcacagggggcgtactacatccctggacaggggcgttccacatat
gttgttccgacacagcagtaccctgtgcagccaggagccccaggcttctatcctggtgca
agccccaccgagtttggaacttacgctggcgcctactacccagcccaaggtgtgcagcag
tttcctgctggtgtggcccccgccccagttttgatgaaccagccaccccagattgctcct
aagagggagcgtaaaacgattcgaattcgagatccaaaccaaggagggaaggatatcact
gaagagatcatgtctggggcccgtactgcctccacacccacccctccccagacggcagga
ggtggtcaggagcctcaagctaatggggagacaccccaggttgctgtcattgtccggcca
gatgaccggtcgcagggagcaatcattgggggccggtcaggtctgcctggcccagagcac
agcccttcagaatcccagccttcatcaccttctccgaccccatcaccccccccaatcttg
gaaccggggtctgagcctaatctcggagtcctctctattcctggggacactatgacaacg
gggatgatacaaatgtctgtagaagaatctacccctatctcccgtgaaactggggagcca
tactgcctctctccagaacccactcctcttgctgaacctatactggaagtagaagtgaca
cttagcaaaccagttccagaatccgagttctcttccagtcctctccaggttcccactccc
ctggcatctcacaaggtggaaatacatgagcctaatggcatggtcccatctgaggatctg
gaaccagaggtggaatcaagcccagagcttgtccctccccctcttccggcttgcccttcc
gaatctcctgtgcttgttgctccaactgcccaacctgaggaactgctcaacggagccccc
tcgccaccagctgtggacttaagcccagtcagtgagccagaagagcaggccaaggaggtc
accacatcagtggcttcccccaccatcctctctgctactccagcttcggctcctccagct
atttcctctgctcaggaggaggaaatggaggaagaagaagaggaagaggaagaagaagca
gtagaagctgagaatgagaaaggaggagaggaactcctccctccagagagtgcccctgtc
ccagcccacttgtcccagaatttggaggtggcagcagccacccaagtggcagtatctgtg
ccaaagaggagacggaaaattaaggagctcaataagaaggaggctgtgggagaccttctg
gatgccttcaaggaggtgaacccagcagtaccagaggtggagaatcagcctcctataggc
aacaatccaggtccagagtctgagggtagcagtgtgcccccacgacctgaggaaacagac
gagacttgggactcaaaggaggacaaaatccacaatgctgagaacatccaacctggggaa
cagaagtatgaatacaagtcagatcagtggaagcctctgaaccttgaggagaaaaagcgt
tatgaccgcgagttcctccttggctttcagttcatctttgccagtatgcaaaagccagaa
ggattgccccatattactgatgtggtgctggacaaggccaataaaacaccactgcggccg
ctggatccctccagactacctggcataaattgtggcccagacttcactccatcctttgcc
aacctcggccgaccagcccttagcaatcgtgggcccccaaggggtgggccaggtggggag
ctgccccgagggccgcaggctggtctgggtcccaggcgttctcagcagggtccccgaaag
gaaccccgcaaaatcattgctactgtattgatgactgaagatataaagctgaacaaagca
gagaaggcctggaaacccagcagcaagcggacagcagctgataaggaccgtggtgaagaa
gatgctgatggcagcaaaacccaggacctgttccgcagggtacgctccatcctgaataag
ttgacaccccagatgttccagcagcttatgaagcaggtgacgcagctggccattgacaca
gaggaacgcctcaaaggggtcattgaccttatctttgagaaggccatttcagagcccaac
ttctctgtggcctatgccaacatgtgccgttgcctcatggcgctgaaagtgcccactaca
gaaaagccaacggtaactgtgaacttccgaaaactgttgttaaatcgatgtcagaaagag
tttgagaaagacaaagatgatgatgaagtatttgaaaaaaaacaaaaagagatggatgaa
gctgctacggcagaggaacggggacgcctgaaggaagagctggaagaggctcgggacata
gcccggcggcgctctttagggaatataaagtttattggggagttgttcaagctgaagatg
ttgacagaggccataatgcatgactgtgtggtcaaactactcaagaaccatgatgaagag
tccctggaatgcctctgccgtttgcttaccaccattggcaaagacctggactttgcaaaa
gccaagccccgaatggatcagtatttcaaccagatggaaaaaatcattaaagaaaagaag
acgtcatctcgcatccgttttatgcttcaggatgtgctagatctgcggcagagcaactgg
gttcctcgccgaggggatcagggtcctaagacaattgaccagatccacaaggaggctgag
atggaagagcatcgggaacacatcaaagtgcagcagctcatggccaaaggcagcgacaag
cgtcggggtggccctccaggcccacccattagccgtggtcttccccttgtggatgatggt
ggctggaacacagtccccatcagcaaaggcagccgccccattgacacctcacgactcacc
aagatcacaaagcctggctccattgattccaacaaccagctctttgcacctggagggcga
ctgagttggggcaagggcagcagcgggggctcaggagccaagccctcagatgcagcatca
gaaactgctcgcccagctactagtaccttgaatcgcttctcagcccttcaacaagcagta
cccacagagagcacagataacagacgtgtggtgcagaggagtagcttgagccgggaacga
ggtgagaaaactggggaccggggagacagactagagcggagtgaacggggaggtgaacga
ggggaccgacttgatcgagcacggacaccagccaccaagagaagtttcagcaaggaagtg
gaggagcggagtagagagcgcccctcccagcctgagggactacgcaaggcagctagcctc
acagaggatcgggaccgtgggcgagatgctgtgaagcgggaagctaccctacccccagtg
agcccccccaaggcctcactttctgaggaggagctggaaaagaaatctaaggccatcatc
gaggaatatctccatctcaatgacatgaaggaggcagtgcagtgtgtgcaggaactggcc
tcaccctctctgctcttcatctttgtgcggcatggcatcgagtccacgctggagcgcagc
accattgctcgtgagcatatggggcgactgctgcaccagctgctctgcgccgggcacctc
tccactgcccagtactaccaagggctgtatgaaatcctggaattggctgaggatatggaa
attgacatccctcatgtgtggctttacctggcagaactggtaacgcccattctgcaggaa
ggtggcatacctatgggagagctgttcagggagattacaaagcctctgagacctttaggc
aaagctgcttccctgttgctagagatcctgggccttctgtgcaaaagcatgggccccaaa
aaggtagggatgctttggcgagaggctggactcagctggaaagaatttctacctgaaggt
caggacgttggtgcattcgtcactgaacagaaggtggagtataccctaggagaggagcca
gaaggccctggtcagagggcactccccttcgaggagctgagcaggcagttggagaagctg
ctgaaggagggtagcagtaaccagcgggtgttcgactggatagacgccaacctgagtgag
caacagatagcatccaacacattagttcgagcccttatgacaactgtctgctattctgca
attatctttgagacccctctccgagtggatgttgcagtgctgaaagcacgagcaagactg
ctacagaaatacctgtgtgatgagcagaaggagctgcaagcgctctatgccctccaagcc
cttgtagtgaccttagaacagcccgccaacctgcttcggatgttctttgatgcgctgtat
gatgaagatgtggtgaaggaggacgctttctacagctgggagagcagcaaggatcccgct
gagcagcagggcaagggcgtggcccttaaatctgtcacagctttcttcaattggcttcgt
gaggccgaggaggaggagtccgaccacaactga
DBGET
integrated database retrieval system
