Sciurus carolinensis (gray squirrel): 124992683
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Entry
124992683 CDS
T08117
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124992683
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124992683
Membrane trafficking [BR:
ncar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
124992683
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124992683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Helicase_dom4_arc
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
124992683
NCBI-ProteinID:
XP_047419777
LinkDB
All DBs
Position
9:17294518..17323889
Genome browser
AA seq
906 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFHPSRSVAQQDLDGKPPSPTPVIMASQTANKEEKSLLELEVDLDNLELEDIDTTDINLD
EDILDD
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgacttgatattaagagaaagctaactgctagatctgatcgagttaagagt
gtggatttgcatcctacagagccatggatgttggcaagtctgtacaatggaagcgtgtgt
gtttggaatcatgaaacacagaccctggtgaagacatttgaagtgtgtgatcttcctgtt
cgagctgcaaagtttgttgcaaggaagaattgggttgtaacaggagcagatgacatgcag
attagagtgttcaattacaatactctggagagagttcatatgtttgaagcacactcagac
tacattcgctgtattgctgttcacccaacccagcctttcattctgactagcagtgatgac
atgcttattaagctctgggactgggataaaaaatggtcttgttcccaagtgtttgaagga
cacacacattatgttatgcagattgtgatcaaccccaaagataacaatcagtttgccagc
gcatctctggacaggaccatcaaggtgtggcagctgggctcttcatcaccaaacttcact
ctggaaggacatgagaaaggcgtgaattgcatcgattactacagtggtggcgacaaacca
tacctcatctcaggtgcagatgaccgtcttgttaaaatatgggattaccagaataaaaca
tgtgtgcagacactggagggacatgcccaaaatgtgtcttgtgccagttttcatcctgag
ttgccaatcatcatcacaggttcagaagatggaacagtccgtatttggcattcaagcact
tatcgccttgagagcactttgaattatggaatggagcgagtgtggtgtgtggccagtctg
agagggtctaacaatgtggctctgggctatgatgaagggagcatcattgttaagcttggt
cgggaagaacctgccatgtccatggatgccaatgggaagatcatttgggccaaacattca
gaagtccagcaggccaatctaaaagcaatgggagatgctgaaattaaagatggagaaaga
ttaccactggcagtaaaggatatgggcagttgtgaaatataccctcagactattcagcac
aatcctaatgggcggtttgtcgtggtgtgtggtgatggggagtatatcatctacacagca
atggccttgagaaacaagagctttggttctgcacaagaatttgcctgggcccatgattct
tctgaatatgcaataagagagagcaacagtgttgtgaagatatttaagaactttaaggaa
aagaaatcatttaaaccagattttggagctgaaagtatctatggaggcttcttgttgggt
gtcaggtctgtaaatggcttggctttctatgactgggacaatacagaactcatacgcaga
attgagattcagcccaaacatattttctggtctgattctggagagcttgtctgtattgcc
accgaggaatcattttttatccttaagtatctgtcagaaaaagtcttggctgcacaggaa
acacatgagggagttactgaagatggcattgaagatgcctttgaggttcttggtgagatt
caggaaattgtgaaaacaggcctgtgggtaggcgactgcttcatttacacaagttctgtg
aacagattaaattattatgttggaggagaaatagtcaccattgcccacttggacaggact
atgtatctcctgggctatattcctaaagacaataggctttatctgggtgataaagaactg
aacatcgttagctactcactgctggtttcagtcctggaataccagactgctgtcatgagg
agggactttagcatggctgataaggtccttcctaccattccaaaagaacagaggaccaga
gtggcacactttttggaaaaacagggcttcaaacagcaagctcttacagtatccacagat
cctgaacatcgtttcgagcttgctcttcaacttggagagttaaaaattgcataccagtta
gcagtggaggcagagtcagaacagaagtggaaacaacttgcagaacttgccatcagtaaa
tgtcagtttggcctcgcccaggagtgtctgcaccatgcccaggattacgggggtctgctg
cttttagccactgcctctggaaatgctagcatggtgaacaagctagcagagggtgcagag
agagatggcaaaaataacgtggcgttcatgagctactttttacagggcaagctcgatgct
tgccttgagctcttgatcagaaccggacgactgccagaagctgccttcctggcccgaact
tacctacccagtcaggtttcaagggtagtgaaactctggagagagaatctctcgaaagtc
aatcagaaagcagcggaatccctcgctgacccaacagagtatgaaaaccttttccccgga
ttaaaagaagcctttgttgttgaagaatgggtgaaggaaacacatgctgatctctggcca
gccaaacagtacccactagtcacgccaaatgaagaaagaaatgtcatggaagaggcaaaa
ggctttcatccctcaagatctgtagctcagcaggatcttgatgggaaacctccttctcct
actccagttatcatggcctcccaaacagccaacaaagaagaaaagagcttactcgaacta
gaagtagatttggacaatttggaattagaagatattgacactacagatatcaatctggat
gaagatattctggatgactga
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