Sciurus carolinensis (gray squirrel): 124992708
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Entry
124992708 CDS
T08117
Name
(RefSeq) germinal-center associated nuclear protein-like isoform X1
KO
K24317
germinal-center associated nuclear protein [EC:
2.3.1.48
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124992708
03036 Chromosome and associated proteins [BR:
ncar03036
]
124992708
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
124992708
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
124992708
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
124992708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM3AP_GANP
NupH_GANP
SAC3_GANP
CID_GANP
RRM_1
DDE_Tnp_ISL3
TPR_IF140_C
Motif
Other DBs
NCBI-GeneID:
124992708
NCBI-ProteinID:
XP_047419835
LinkDB
All DBs
Position
9:complement(141119997..141163998)
Genome browser
AA seq
1974 aa
AA seq
DB search
MNPTNPFSGQQPSTFAASSSSSVGTFQAKPPFRFGQPSLFGQNSTLSGKNTAFSQVPSFV
APSSSVQAFGLTQTSSAGLFSGPENTTFVAVSGPSSSSLPGNAGFSFKSPTSLGVFPSTS
TFGSETGEIASCGFGKTEFSFKPLENAVFRPILGAESEPEKTQSQITSGFFTFSHPISSG
PGGLTSFSFPQVTSSSATNSNFTFSKPVSSSNSSSAFTPALSNQNVEEEKRGPKSIFGSS
NSSFSSFPISSSGSLGEPFPVSKTGVRPGCEEAVSQVEPLSGLMKGLKRKEDQDRSPRRH
GHEAEDSDPLSRGDHPPDKRPVRLNRPRGGTLFGRTIQDVFKSNKEASRLGNKEPRKEGG
FVESGESDHIAIPGGSQSVLAPSRLPGVNKEEEIEGRDKKEDSLRGTMRQSKRSESTDSL
GGLSPAEVTAIQCKNIPDYLNDRTILEKHFSKIAKVQRIFTRRSKKLAVVHFFDHASAAL
ARKKGKSLHKDVAIFWHKKKISPNKKPFSLKEKKPGDGEASQGTEDASFQHSPLGKPTVR
PAVGGLNKSSPVKKPSLLKAHQFEGDPFDSGSEGSEGLGPSVSSLSTLIGTVAETSEEKY
RLLDQRDRIMRQARVKRTDLDKARTFVGTCPDMCPEKERYMRETRSQLSVFEVVPGTDQV
DHAAAVKEYSRSSADQEEPLPHELRPSAVLSRTMDYLVTQIMDQKEGSLRDWYDFVWNRT
RGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKINNENMTKCLQSLK
EMYQDLRNKGIFCASEAEFQGYNVLLNLNKGDILREVQQFHPDVRNSPEVDFAVQAFAAL
NSNNFVRFFKLVQSASYLNACLLHCYFNQIRKDALRALNIAYTVSTQRSTVFPLDGVVRM
LLFRDCEEATDFLNYHGLTVSDGCVELNRSAFLEPEGLSKARKSVFITRKLTVSVGEVVN
GGPLPPVPRHTPVCSFNSQNKYVGESLAAELPVSTQRPSVDSLGDGRGEECGADLDVPPQ
GLLPQPLPAPTPSPVSLPHVPPPAPSVAPSLFQSSVQSELLPPKPAPVYSDADLAQVVDE
LIQEALQRDCEEVSSAGAAYAAVALGVSNAAMEDLLTATTTGLLRHVAVEEVTKERERRE
EEKRRAEEERLKQERELVLTHLSQSLAAELTELMVTECVWETCSQELKNAVETDQKVRVA
RCCEDICAHLVDLFLAEEIFQTAKETLQELQCFCKYLQRWREAVTARKKLRRQMRAFPAA
PCCVDVNDRLRALAPSAECPIAEENLAKGLLDLGHAGKVGISCTRLRQLRNKTTHQMKVQ
HFHQQLLSHAAWAPLDLLSLVTEHLPERRERVFWKLVLVLPDGEEQSPGSPGRILANWLK
AKFLGDDGSVGDMCSNAGEIQTLTMFNALSSKGDQTVSINVCIKVACGTLSDGALDAVET
HKDLLGASGLMLLLAPKVKSDDVAEEDVYWLSALLQLKQLLQAKPFQPALPLVVLVPSSG
RDDVRKEVEDGLMLQDLVSAKLISDYTVTEIPNSINDLQGTMKVSQAVQWLVSRCPHALD
LCCQTLIQYIEDGIGHEFSGRFFHDRRERRLGGLASQEPSAIIELFNSVLQFLASVVSSE
QLCDLSWPVTEFAEAGGSQLLPHLHWNSPEHLAWLKQAVLGFQLPQMDLPPPAAPWLPVC
SMVIQYTSQIPSSRQTQPVLQSQVENLLRRTYCRWKNKSPSLGQGAGPSVEEIPWDDIIA
LCINHKLRDWMPPRLPVISEALTEDGQICVYFFKNHLKNYDVPLSWEQARVQTQKELQLS
QGRLGIKSFHSSTSNFPTPLPHVHHKGKRNAECDREERNLSAEDLIRGASAQELLAQCLS
SSLLLEKEENKRFEDQLQQWLSQDSRTVTDSTSLPLYLPQTLVSVPQTIKPVAKTSTTTS
SQNVRTEEQLQFSEVRGTSLTERLKHLERLIQSSREEEVASELHLSALLDMVDI
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaacaaaccctttcagtggacagcagcctagtacttttgcagcatcttctagt
agttcagtgggaacatttcaggccaaaccaccatttcggtttggtcaaccttctcttttt
gggcaaaacagtacattgtctgggaagaacacagcattctcacaggtacccagctttgtg
gcaccttcctcttcagtgcaagcctttggactcacccaaacctcaagtgctggactcttt
tctggacctgaaaacacaacttttgtagctgtctctgggccttcaagttcatctttgcct
ggaaatgcaggatttagtttcaaatcacccaccagccttggggttttcccaagtacttct
acttttggatcagaaactggagaaatagcaagctgtggctttggaaaaacagaattcagc
tttaaacctctggaaaatgcagtgttcagaccaatactgggggctgagtctgagccagag
aaaacccagagtcaaattacttctgggtttttcacattttcccatccaattagtagtggg
cctggaggcctgacttctttttcttttcctcaagtgacaagtagttcagctaccaattca
aatttcaccttttcaaaaccagttagtagtagtaattcatcatctgcctttacccctgct
ttgtcaaaccaaaatgtagaggaggagaagagaggacctaaatcaatttttggaagttct
aatagtagcttcagtagcttcccaatatcatcttctgggtctttgggggaacccttccct
gttagcaaaacaggtgtccgaccagggtgtgaagaagctgtttcccaggtggagccactt
tccggcctcatgaaaggactgaaaaggaaagaggaccaggatcgctcccccaggaggcat
ggccacgaggcagaagattcagaccctttgtcaaggggtgatcatcctcccgataaacga
cctgtccgcctgaatcgacctcggggaggcactttgtttggtaggacaatacaggatgtc
ttcaaaagcaataaagaagcaagtcgtctgggcaacaaggaacccagaaaggaaggtggc
tttgtggagtctggggaaagtgaccacatagctatcccaggagggagtcagtctgtcctg
gcaccttcccggcttccaggtgtgaataaagaggaagaaattgaaggcagagataaaaaa
gaagattctctaaggggaactatgcgtcagagtaaaagaagcgagagcacagacagtctt
gggggcttgtctcccgctgaagtcacagcaatccagtgcaagaacatccctgactatctc
aatgacagaactattctggagaaacactttagcaaaattgctaaagtgcagcgcatcttt
accaggcgcagcaagaagcttgcagtagtgcatttttttgatcatgcatctgcagccctg
gcaaggaagaaggggaaaagcttacataaggatgtggctatcttttggcacaagaagaaa
ataagtcccaataagaaacccttttcgctgaaggagaagaaacctggtgatggtgaagcc
agccagggaacagaggatgcatcctttcagcactcccctcttggcaaacccacggtgagg
cctgcagttggaggcctgaataaaagctctccagtgaagaagccaagtcttctaaaagct
caccagtttgagggagacccatttgattctgggtctgagggctctgagggccttggacca
tctgtgtcatccctcagtaccctgataggcactgtggctgagacatctgaggagaagtat
cgcctgcttgaccagagagaccgaatcatgcggcaagctcgggtgaagaggaccgatctg
gacaaagcgaggacttttgttgggacgtgccctgacatgtgtcctgagaaggagcggtac
atgcgggagacccggagtcagcttagtgtttttgaagtggtcccaggcactgaccaggtg
gaccatgcagcagctgtgaaggagtatagccggtcctcagctgatcaggaggagcccctg
ccacatgagctacggccttctgcagtgctcagcaggaccatggactacttggtgactcag
atcatggaccagaaggaaggcagcctgcgggactggtacgacttcgtgtggaaccgcaca
cggggcatacggaaggacatcacacagcagcacctctgtgatcccctgacggtgtccctg
atagagaagtgcacccgatttcacatccactgtgcccacttcatgtgtgaggaacccatg
tcctcctttgatgccaagatcaacaatgagaatatgaccaagtgcctacagagtctaaaa
gagatgtaccaagacctgaggaacaagggcatcttctgtgccagtgaggctgagttccag
gggtacaatgttctgctcaatctcaacaagggggacatcctgagagaagtgcagcagttt
caccctgacgttagaaactcccctgaggtggattttgctgtccaggcttttgctgcattg
aacagtaataattttgtgagatttttcaaactggtccagtcagcttcctatctgaatgcg
tgtctgttacactgttatttcaatcagatccgcaaggatgctctccgggctctcaacatt
gcatacacggtgagcacacagcgatctactgtctttcccctggatggtgtggtgcgtatg
ctgctgttcagagattgtgaagaggcaacagacttcctcaactatcatggtctcactgtt
tccgatggctgtgtcgagctgaacaggtctgcattcctggaaccagagggattatccaag
gccaggaagtcagtgtttattaccaggaagctgacggtgtctgttggggaagttgtgaat
ggagggccgttgcccccagttcctcgtcacacacccgtgtgcagcttcaactcccagaac
aagtacgtcggggaaagtctggccgcagagctgcctgtcagcactcagagacccagcgtg
gattcactgggtgatgggagaggagaagaatgtggggcagacctggatgtgccaccacag
ggtctccttccgcaacctcttccagcccccacaccttcacctgtatctctgcctcatgtc
ccaccaccagccccatctgtggcacccagtctcttccagtcctccgtgcagtccgagctg
ttgcctccaaagcctgctcctgtgtactctgatgcggaccttgcgcaggtggtggacgag
ctcatccaggaggctcttcagagggactgtgaggaagtgagctcggctggggcagcttat
gcagctgtcgctctgggtgtttctaatgctgccatggaggatctgttaacagctacaacc
acaggtcttttgaggcatgtcgcagttgaagaagtgactaaggaaagggagcgaagggag
gaggaaaagaggcgggctgaagaggaaaggctgaaacaagagagagagctggtgttaact
catttgagccagagcttggctgcagagctgacagaactcatggtgacagagtgtgtgtgg
gaaacttgctcccaggagttaaagaatgcggtggagacagaccagaaggttcgtgtggcc
cgttgttgtgaggatatctgtgcccacctggtggacttgtttcttgctgaggaaattttc
caaactgcgaaggagacactgcaggaacttcagtgcttctgcaagtatctacagcggtgg
agggaagctgttacagcccggaagaaactaaggcgtcagatgcgtgcctttcctgcagca
ccctgctgtgtggatgtgaatgaccggctgcgggcattggcacccagtgcagagtgtccc
attgctgaggagaacctggccaaaggcctcttggacctgggccatgcagggaaagtgggc
atatcctgtaccaggttgaggcagctcagaaacaagacaactcaccagatgaaggttcag
cacttccaccagcagctgctgagccatgctgcatgggcgcctctggacctgctgtccctt
gtgactgagcacctccccgagaggcgcgagcgagtgttctggaagctggtactggtgctg
cctgatggagaagagcagtccccagggagtcctggcagaattctagcaaattggctaaaa
gctaagttcctgggagatgacggctcggttggtgacatgtgttctaatgctggtgagatc
cagacactcacaatgtttaacgcactcagcagcaaaggggaccagacagtttctatcaac
gtgtgtatcaaggtggcctgtgggaccctcagtgatggtgccctcgatgctgtggagacc
cacaaggacctcctgggagccagcgggctcatgttgctgcttgcccccaaagtgaagagc
gacgacgtggcagaggaggatgtgtattggctgtcggccttgttacagctcaagcagctc
ctgcaggccaaaccctttcagcctgcacttccactggtggtccttgtgcccagctccgga
agggatgatgtcaggaaggaagtggaggatggtctgatgctgcaggacttggtttcagct
aagctgatttcagattacactgtcactgagattcctaattctattaatgatttgcagggc
accatgaaggtttctcaggcggtgcagtggctggtgtctcgctgtcctcatgccctggac
ctttgctgccagactcttattcagtacattgaggatgggattggccatgagtttagtgga
cgttttttccatgacagaagagagagacgtctgggtggcctggcctcacaggagcccagc
gccatcattgagctctttaacagtgtgctgcagttcctggcctctgtggtgtcctctgag
cagctgtgcgacctgtcatggcctgtcactgaatttgctgaggcggggggtagccaactg
cttccgcacctgcactggaactccccagagcacctggcttggctgaagcaggctgtgctt
gggtttcagctcccgcagatggaccttccacccccagcggcaccctggcttcctgtttgc
tccatggttatccagtatacctcccagatccccagctcacgccagacacagcccgtcctc
cagtctcaggtggagaacctgctccgcagaacatactgcaggtggaagaacaagagcccc
tcactgggccagggggcaggaccctctgtcgaggagattccttgggatgacatcattgcc
ttgtgcatcaaccacaagctgagggattggatgccccccaggcttcctgtcatctcagag
gcactgactgaagatggtcagatatgtgtatatttttttaaaaaccatttgaaaaactac
gatgttcctttgtcatgggaacaagccagagtgcagacgcagaaggagctacagctgagt
cagggacgtttggggataaagtcttttcattcttctacaagcaattttcctactccgtta
cctcatgtgcaccataaagggaagaggaatgcagagtgtgaccgagaggagcggaatctc
agtgcggaagacctgattcgaggagcttctgcccaggagctcctggcacaatgtctgtcc
agtagtctgctgctggagaaggaggagaacaagaggtttgaagatcaacttcagcagtgg
ttgtctcaagactcaagaacagtgacagattcaacttctcttcccctctaccttcctcag
acactagtgtctgttcctcagactatcaaacctgtggcaaaaacatctacaacaaccagt
tcacagaatgtaaggacagaggagcaattgcagttttcagaggtgagaggcacatctctg
acagaacggttgaagcatctggaaagactgatccagagttcaagggaagaggaagttgcc
tctgaactccatctctctgcactgctggacatggtggacatttga
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integrated database retrieval system
